Lacticaseibacillus rhamnosus Lc 705: LC705_01193
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Entry
LC705_01193 CDS
T00990
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl00260
Glycine, serine and threonine metabolism
lrl00460
Cyanoamino acid metabolism
lrl00630
Glyoxylate and dicarboxylate metabolism
lrl00670
One carbon pool by folate
lrl00680
Methane metabolism
lrl01100
Metabolic pathways
lrl01110
Biosynthesis of secondary metabolites
lrl01120
Microbial metabolism in diverse environments
lrl01200
Carbon metabolism
lrl01230
Biosynthesis of amino acids
lrl01240
Biosynthesis of cofactors
lrl04981
Folate transport and metabolism
Module
lrl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LC705_01193 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LC705_01193 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LC705_01193 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LC705_01193 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LC705_01193 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LC705_01193 (glyA)
Enzymes [BR:
lrl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LC705_01193 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
CAR90032
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Position
1182762..1184003
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AA seq
413 aa
AA seq
DB search
MVGMDLMAHDPEVFRAIHEEEARQEHNIELIASENIVSPAVRAAQGSVLTNKYSEGYPGH
RYYGGNQYIDVVENLAIERAKKLFGAEFANVQPHSGSQANMAAYRAFLEDGDKVLAMDLT
DGGHLTHGSPVSFSGQEYHFYHYGLDPKTERLDYAKIREQAEQVKPRLIVAGASAYSREI
DFKKFREIADHVGAFLMVDMAHIAGLVAAGLHMNPVPYSDVVTTTTHKTLRGPRGGMILA
KAEYGKAINSALFPGIQGGPLDHVVAAKAVALGEALQPAFKTYAQQIIDNMHAMVAGFKE
DEHLRLISGGSDNHMVLVDVTGYGVNGRQVQDLLDEVDITTNKNQIPGEQNGPFKTSGIR
VGTAAITTRGFTPEESKRVAELISMAIAHRDEQPVLDQIRQEVLALTARHPLS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
gtggtaggcatggatttaatggcgcatgatccagaagttttccgcgcaattcacgaagaa
gaagcgcgtcaggaacataatatcgaactaattgcttcggaaaatattgtttctccggca
gtgcgggcggcacaagggtcggtgttgacgaataagtattctgaaggctatcccggtcat
cgttattacggtggcaatcaatacatagacgtggttgaaaatcttgctattgagcgggcg
aagaagctttttggtgctgaatttgccaatgttcagccgcattctggttcgcaggcaaac
atggcggcatatcgggcgtttcttgaagacggcgataaggttttggccatggacttaacg
gatggcggacatctcacccatggtagtccggtcagttttagtggtcaggaatatcatttc
taccattatggtttggacccgaaaacagagcgcctcgactatgccaaaattcgcgagcag
gcagaacaagtcaagccgcgtttgattgtggctggtgcgtccgcttacagtcgggaaatt
gattttaaaaaattccgcgaaattgctgatcatgtcggtgcctttttaatggttgatatg
gcgcacattgcgggcttggttgcggcgggattgcacatgaatccggtgccgtattcagat
gtggtcacgaccacaacgcataagaccttgcgtggaccgcgtgggggcatgattttggct
aaggcggagtatggcaaagcaattaattcagccttgttccccggcattcaaggcggacca
ctggatcacgtggtggcagctaaggcggtggcattaggcgaagcgttgcagccggcgttt
aagacttacgcgcagcagattattgacaacatgcatgcgatggtggcaggtttcaaggaa
gatgaacacttacgcttgatttccggcgggtctgacaatcacatggtcttagtcgatgtc
accggttacggggtcaatgggcgccaggttcaggacttgctggatgaagtcgatatcacc
acgaacaagaatcaaattcccggcgagcaaaatggtccgtttaaaaccagcggcattcgg
gtcgggacagctgcgattaccacgcgtggatttacgccagaagaaagcaaacgcgtggca
gaactcatcagcatggccattgcgcatcgtgacgaacagccagttttggatcaaattcgg
caagaagttcttgcactgactgcccgtcatcccttatcatag
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