Lacticaseibacillus rhamnosus Lc 705: LC705_01406
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Entry
LC705_01406 CDS
T00990
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrl03032
]
LC705_01406 (hup)
03036 Chromosome and associated proteins [BR:
lrl03036
]
LC705_01406 (hup)
03400 DNA repair and recombination proteins [BR:
lrl03400
]
LC705_01406 (hup)
DNA replication proteins [BR:
lrl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LC705_01406 (hup)
Chromosome and associated proteins [BR:
lrl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LC705_01406 (hup)
DNA repair and recombination proteins [BR:
lrl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LC705_01406 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Ribosomal_L12
DUF2780
Motif
Other DBs
NCBI-ProteinID:
CAR90245
LinkDB
All DBs
Position
1400984..1401259
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAELIESVASATGLTKKDATAAVDAVFGSIQDSLSKGDKVQLIGFGNFEVRERAARK
GRNPQTGAEIKIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcagaattgatcgaaagtgttgcaagtgcaaccggtttgaccaagaag
gatgcaaccgcagctgttgatgcagttttcggctctatccaggattccctttcaaagggt
gacaaggttcaattaatcggctttggtaacttcgaagttcgtgagcgcgctgctcgtaag
ggtcgcaacccacaaactggtgcagagatcaagatcccagcatccaaggtaccagcattc
aagcctggtaaagcacttaaggatgccgttaaataa
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