Lacticaseibacillus rhamnosus Lc 705: LC705_01763
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Entry
LC705_01763 CDS
T00990
Symbol
cbf
Name
(GenBank) CMP-binding factor
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrl03019
]
LC705_01763 (cbf)
Messenger RNA biogenesis [BR:
lrl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LC705_01763 (cbf)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
CAR90602
LinkDB
All DBs
Position
complement(1778596..1779564)
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AA seq
322 aa
AA seq
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MAKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDATENDIAQ
FKAGEVVQLSGKRELYQGNPQIKIYSMRLATQEEGNDPRTFVERAPEAPNAMEEELNSFI
FEITNANWNRIVRKLIQDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKNVVAQYSS
LNKTLLYAGAILHDLGKTIELSGPISTEYTVPGNLIGHIVLIDEQIVLAAHQLKIDINSE
DMLLLRHVVLAHHGLLEYGSPVRPQLLEAQVLHDLDEMDASINMMTTAYQHVDPGTFTER
LFGMDNRRFYRPTNGQTYPDPH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacggctttttgattaccataatgaagaagatgtgcgacttcctgtattaatt
aaatcagcggaagtccgggtagcaaaaaatggcaagaaatttattgccatgatttttcaa
gacaattccggccatatttcgggtaaattctgggatgcaaccgaaaatgatattgcccag
ttcaaagccggtgaagtggtgcagctgtcaggaaagcgggaattgtatcaaggcaacccg
cagatcaagatttactcaatgcgcttggcaactcaagaagaaggaaatgatccgcgtacc
ttcgttgaacgcgcaccagaagcgcccaatgccatggaagaagagctaaacagtttcatt
tttgaaattactaatgccaattggaatcgaatcgtccgaaaactgattcaagatcataaa
aaagcgttcttcagttatccagctgccaagtcgaatcatcatgcctttgccggtgggctt
gcttttcataccctgagtattctgcgcttggctaaaaatgtggttgcccagtattcaagt
ttgaacaagaccttgctttatgcgggtgcgattttacatgacttgggcaagacgattgaa
ttaagtggtccgatttcaactgaatatacggtacccgggaatctgattgggcatattgtc
ctgattgatgaacaaattgtgttggcagcccatcaactaaagatcgatattaatagtgag
gatatgctattgctgcggcatgttgtattagcgcaccatggtttattggaatatggctcg
ccggtgcggccgcaactacttgaggcccaggtgttgcacgatttggacgaaatggatgcc
tcaatcaacatgatgacgactgcctaccaacatgtcgatccaggcacctttactgaacga
ctctttggcatggacaatcggcgtttctaccggccaacaaatggtcaaacatatccggat
ccgcattaa
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