Lacticaseibacillus rhamnosus Lc 705: LC705_02463
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Entry
LC705_02463 CDS
T00990
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lrl
Lacticaseibacillus rhamnosus Lc 705
Pathway
lrl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LC705_02463 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrl03021
]
LC705_02463 (rpoA)
03400 DNA repair and recombination proteins [BR:
lrl03400
]
LC705_02463 (rpoA)
Enzymes [BR:
lrl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LC705_02463 (rpoA)
Transcription machinery [BR:
lrl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LC705_02463 (rpoA)
DNA repair and recombination proteins [BR:
lrl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LC705_02463 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CAR91302
LinkDB
All DBs
Position
complement(2500601..2501539)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKVDESTNYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVSSIQIDGVL
HEFSTIDGVLEDVTQIILNIKKLALKMNTDEDKNIEIDVNGPAKVTAADIVADPDVEVLN
PEQYICTVADGGHFHVRMTVKKGRGYVAADQNKSDDMPIGVLPIDSIFTPISRVNYQVES
TRVGRRNDFDKLTLDVWTNGSISPREAISLAAKILTEHLDIFVNLTDEAKNAEIMVEKEE
THKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEEVKNK
LADLGLGLRKED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattcgaaaagccgaacattaccaaagttgacgaaagcaccaactatggcaag
tttgtggttgaaccgttggaacgcggctacggtactacgttaggtaactcgttgcggcgg
atccttctttcttcattaccgggcgcagctgtcagcagcattcaaattgatggggtactt
catgagttctccacaattgatggtgtattggaagatgtgactcagatcattttgaatatc
aagaaattggcactcaagatgaacactgatgaagataagaacatcgaaattgatgtcaac
ggtccggctaaggtaactgctgctgatatcgtcgctgatcctgatgttgaggtcttaaat
cctgaacagtatatctgtactgttgcagacggcgggcacttccatgtacgtatgaccgtt
aaaaagggtcgcgggtatgtggcagctgaccagaataagtctgatgacatgccaatcggt
gttttgccgatcgactcgattttcaccccgatcagccgggttaactatcaagttgaaagc
acccgtgttggccgtcggaatgatttcgacaagttaacgctggatgtttggactaatggc
tcaatctcgccacgtgaggccatcagcttagcagcgaagatcctgactgaacacctggat
attttcgtcaatttgacggatgaagctaagaacgctgaaatcatggttgaaaaagaagaa
acgcacaaggaaaaaatgcttgagatgaccatcgaagagcttgacttgtcggttcgttcc
tacaactgcttgaagcgtgccgggattaatacggtccaggagttaaccaacaaaacagaa
gccgatatgatgaaagttcgtaacttaggccgcaagtcacttgaagaagttaaaaacaag
ttggcagatcttggcttaggattgcgtaaagaagactaa
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