Ligilactobacillus ruminis: LRC_00890
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Entry
LRC_00890 CDS
T01626
Name
(GenBank) Exopolysaccharide biosynthesis protein
Organism
lrm
Ligilactobacillus ruminis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
CoA_binding_3
RmlD_sub_bind
3Beta_HSD
TrkA_N
adh_short
CoA_binding
C2185-like_N
PglD_N
KR
DPM3
Motif
Other DBs
NCBI-ProteinID:
AEN77422
UniProt:
G2SPZ6
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Position
103209..105218
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AA seq
669 aa
AA seq
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MKNGSEKKFEHWKLISLYLVVYDIIAVNFSYFAALFLRFDMRISSIPPEYLHAFIMFAPF
YTVFALTVFRFLRLYNSLWQFASFDELNRIISSSVITTVFQMLFMTCLIVRMPVSYYIFG
ALIQFAMIVGIRFSYRYINLERNRRYNTNAAIHNVMVIGAGAAGKTILREMRNSQGMTGK
ACCVIDDNPNKWDRTMEGVPVVGGRDAILSAVKKYSIDQIMFAIPSASTEDKRDILNICK
ETKCELKSLPGIYQLANGEVSLSKMKAVNVEDLLGRDPIKVDMAEVFRQLTGKTILVTGG
GGSIGSELCRQIAAHNPKQLIIFDIYENNAYDIQQELVRKYGDKLNLVTLIGSVRDSRRL
DMIFDKYRPDIVYHAAAHKHVPLMEASPNEAIKNNVIGTYKTTYMALKYGVEKFVLISTD
KAVNPTNIMGASKRLCEMVIQSMERISENDNFDSLPLLHDHKKDGLKEEKPKATKTKFVA
VRFGNVLGSNGSVIPLFKKQIAEGGPVTVTHPDIIRYFMTISEAVSLVLQAGTYAKGGEI
FVLDMGSPVKIDTLARNLIKLSGHEPDVDIPIVYTGLRSGEKLYEEKLMKEEGLKKTKNE
LIFIGQPIPFDMDNFFKDLENLSQASYQNSEIIVSMVEKVVSTFHPVGAHPTGKEEIYQK
WCTDSERNS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacggttcagaaaagaaattcgaacattggaaactgatttccttgtacttggtt
gtttatgacattattgcggtgaatttttcttattttgccgcactgtttctcaggtttgat
atgcgcatttcaagcatcccccctgagtatctgcatgccttcataatgtttgcaccattc
tatacggtatttgcactaactgtgtttcgttttctgagactttataacagcttgtggcag
tttgcaagctttgatgaacttaacagaattatttcttcatctgtgataacaaccgttttt
cagatgcttttcatgacatgtctgattgtcaggatgcctgtatcctattacattttcggg
gccctcattcagtttgccatgattgtcggaatacgtttcagttacagatatatcaatctt
gagagaaatcgtcgttacaataccaacgctgccattcacaatgtcatggtaatcggtgca
ggtgctgccggcaagacaatcctgcgagagatgcgtaattcccagggaatgactggaaag
gcctgctgtgtcattgatgacaacccaaataagtgggaccggacaatggaaggagttcct
gttgtcggtggccgcgacgcaatcttaagtgccgttaagaagtacagtattgaccagatt
atgtttgcaattccgtcggcttcaaccgaagacaagcgggatattcttaatatctgcaag
gagacaaagtgtgaactcaagagtttgccgggaatttatcagcttgccaacggtgaggtg
tcgttgagcaagatgaaggctgtcaatgttgaagatcttcttggaagagatcccattaaa
gttgacatggcagaggtcttcaggcagcttaccggcaagaccatccttgttacaggtggt
ggcggatcaatcggcagcgaattatgccgtcagattgcagcacataatccgaagcagcta
attatctttgacatttacgagaacaatgcctatgacattcagcaggaacttgtccgtaag
tatggcgataagctcaatcttgtgacgctgatagggtccgttcgtgacagccgtcgactg
gacatgatttttgacaagtatcgtcccgatattgtctaccatgcggcagctcataagcat
gttccgttaatggaagcaagtcctaatgaagcaatcaagaataatgtcatcgggacatat
aaaacgacatatatggcacttaagtacggagttgagaaattcgttcttatcagtacggat
aaagcggtcaatccaacgaacatcatgggtgcaagcaagcgtctttgcgaaatggttatc
caaagcatggaaagaatcagcgagaacgataattttgattctcttccgttgcttcatgat
cataaaaaagatggtttaaaagaagaaaaaccaaaagcaactaagacaaagttcgtagct
gttcgttttggcaatgttttggggagcaatggcagtgttatcccgctttttaagaaacag
attgcagaaggtggcccagtaacggttactcacccagacattattcgttatttcatgacc
atatctgaagctgtcagtttagttcttcaagctggtacatacgcaaagggcggagagatt
tttgtgttggatatggggtctcctgtcaagattgataccttggcaagaaatttgatcaaa
ttgtcaggacatgaaccagatgtcgatattccgattgtttatacgggtcttcgaagcgga
gaaaagctgtatgaagaaaagctcatgaaggaagagggcctaaagaagactaaaaatgag
ttgatttttatcggtcagccgattccgtttgatatggacaacttctttaaagatcttgaa
aatctgtcacaggcaagctatcagaatagcgaaatcattgtatcaatggttgagaaagta
gtttcaacattccatccggttggcgcgcatccgactggcaaggaagaaatttatcagaaa
tggtgtactgattcagagaggaactcataa
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