Ligilactobacillus ruminis: LRC_00910
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Entry
LRC_00910 CDS
T01626
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm00300
Lysine biosynthesis
lrm00470
D-Amino acid metabolism
lrm01100
Metabolic pathways
lrm01110
Biosynthesis of secondary metabolites
lrm01120
Microbial metabolism in diverse environments
lrm01230
Biosynthesis of amino acids
Module
lrm_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRC_00910 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRC_00910 (lysA)
Enzymes [BR:
lrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LRC_00910 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF3502
DUF6762
Motif
Other DBs
NCBI-ProteinID:
AEN77424
UniProt:
G2SPZ8
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All DBs
Position
106071..107321
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AA seq
416 aa
AA seq
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MSKKLQKKINTETLINLSKEYGNAFYLLDSDTFKENYVELSNAFKKYYPKFNIAYSYKTN
YIPKLVKIVNDFGGYAEIVSDMEEQIAIHSGIEYNRIIWNGPIKNKEKIEEFLLCGGMVN
IDSKQEADIIFSISKRHLDKKLHVGVRCNFDVNDGVMSRFGIDVEGNDFDYVLSYVKNSK
NIDLVELQCHFAKRLSKYWSKRADGMLNIYDRVVKDYNLKPQRIDLGGGIYGKMPDDLKN
QLGLGDSENYDSYAEAAAKKFADHFANVPDAPELVIEPGSALAGDCMKFVSRIETFKNVR
GKDIATVIGSQKNISMSGINPPYEIVPGLREEETIDYKDVDIAGFTCIEGDVLVRNHSGK
LSIGDFLVISNCGSYSIVMKPPFILPNFAVLDICRDNCEVIKRAENFEDLFRTYIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaagttacaaaaaaaaattaataccgaaactttgataaacttatcgaaagag
tatgggaatgccttttatttattagactccgacactttcaaagaaaattatgttgaactt
tctaatgcttttaaaaagtattatcctaagtttaatattgcttactcttataaaacaaac
tacattcctaagcttgtaaaaattgttaatgactttggtggttatgctgaaatagtctct
gatatggaggaacaaatagcaattcatagcggtattgaatataatcgtattatttggaac
ggaccaatcaagaataaagagaaaattgaagaatttcttctttgtggtgggatggtcaat
attgattccaagcaagaggctgatattattttttcaatttccaaacggcacttggataaa
aagttgcatgttggggtaaggtgtaatttcgacgttaacgatggtgtaatgtcaaggttt
gggattgatgttgaaggtaacgattttgattatgttctttcttacgtaaaaaattctaaa
aacattgatttggttgaattgcaatgccattttgcaaagagactttctaaatattggtct
aaaagagccgatggaatgttgaacatatacgatcgcgttgttaaagattataacctcaag
cctcagcgcatagatcttggtggcggaatttatggtaagatgccagatgatttgaaaaat
cagttagggttgggagattctgaaaattatgattcatatgcagaagctgcggccaaaaaa
tttgcggatcattttgcaaatgtgccagatgctccagagttagttattgaaccgggctca
gcacttgcaggggactgcatgaaatttgtcagccgtattgaaacgttcaaaaacgttagg
ggaaaagatatagctacagttattggttcacagaaaaacattagcatgtcagggataaat
cctccttatgaaattgtacccggattacgagaagaagaaacgattgattataaagatgtt
gatattgcaggttttacttgtatagaaggggatgtgcttgtaaggaatcatagcggtaag
ctttctattggtgattttttggttatcagcaactgcggatcatattccatagttatgaag
ccaccgtttattcttcctaattttgcagtacttgatatttgtagggataattgtgaggtt
atcaagcgtgctgagaattttgaagatctttttaggacgtacattttttga
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