Ligilactobacillus ruminis: LRC_01880
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Entry
LRC_01880 CDS
T01626
Symbol
oppA
Name
(GenBank) Oligopeptide-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm01501
beta-Lactam resistance
lrm02010
ABC transporters
lrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRC_01880 (oppA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRC_01880 (oppA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LRC_01880 (oppA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrm02000
]
LRC_01880 (oppA)
Transporters [BR:
lrm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
LRC_01880 (oppA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEN77516
UniProt:
G2SQG7
LinkDB
All DBs
Position
209612..211240
Genome browser
AA seq
542 aa
AA seq
DB search
MKLAKVAAAGSVAALCALMLGACGSKASDSASKQVLNWNESAELPTMDLSKATDVVSFDT
LNNTMEGLYRLGKDSKIEPGIATKTKVSSDGLTYTFTLRKDAKWSNGDKVTAKDFVYSWR
RTLDPKTNSQYAYLFEGIKNATDVMNGKKSTKEVGVKADGDYKLVVTLDKQIPYFKLLMG
FPVFFPQNQKTVEKYGSKYGTASKYMCYDGPFNLTKWTGTNLSWSLKKSDNYWDKKSVKL
DAINFKVNKSNSTAYNLYQSGKLDATSLSAEQAKQLKGQSGYTVRQAASAFYFQYNQTKP
EFQNKKIRQAISMVIDRKEFVNKVLGNGSIPAKGLVSSGLATRNGKDFADASYVKDGVTV
NIAKAKKLWAEGLKEIGKDSLTFGLLSDDTDIAKKTTEFIQSAIESNLKGAKVECANVPF
KTRLNRTNQGQFGIVISAWGADFADPISFLDMFTSNNSYNAGKWKNAQYDNLIEASKSTD
AGNAAKRWDDLVNAEKILIQEQGISPLYQQATAWMVKPKVKGVIYNSAGANYNFKNTYVS
GN
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagcaaaagttgcagctgcaggctctgttgctgccttgtgtgctttgatgctt
ggcgcttgcggttccaaagcaagcgattcagcttcaaagcaggttttgaattggaacgaa
tctgctgaattgccgacaatggatctttccaaggcgactgacgttgtcagtttcgatacg
ttaaacaacacgatggaaggtctttatcgtttgggcaaggattcaaagatcgaaccaggt
attgctactaagacaaaggtttcttcggacggcttgacatatacgtttaccttgcgcaag
gatgccaagtggtcaaacggtgacaaggttactgccaaggactttgtctactcatggcgt
cgtacgcttgatcctaagacaaattcgcaatatgcatatttgtttgaaggaatcaagaac
gcaactgacgttatgaacggcaagaagtcaaccaaggaagtcggcgtcaaggctgacggc
gactacaagctggtcgttacgttggacaagcagattccatactttaagctgttgatgggc
ttcccagtgttcttcccgcaaaatcaaaagactgttgaaaagtacggttccaagtacggt
actgcttccaagtacatgtgctacgacggtccgttcaatttgacgaagtggacgggtacg
aacctttcctggtctttgaagaaaagcgacaattactgggataagaagagcgtcaagctt
gatgctatcaacttcaaggttaacaagagcaactcaacggcttacaacctgtatcaatcc
ggcaagcttgatgcaacgagcctgagtgcggaacaagccaagcagttgaagggtcaatcc
ggatatacggttcgtcaggccgcttcggcattctatttccagtacaaccaaacaaagcct
gaattccagaacaagaagattcgtcaagcaatctcaatggtcattgaccgcaaggaattc
gtaaacaaggttcttggcaacggttcaattcctgcgaagggtctggtctcaagcggtctt
gcaacgcgcaatggcaaagattttgctgatgcttcctacgtcaaggacggcgtaaccgta
aacattgcaaaggccaagaaactctgggctgaaggtttgaaggaaatcggcaaggacagc
ttgacgttcggacttttgagcgatgacaccgatattgcaaagaagacgactgaattcatc
caaagcgcgattgaatcaaacttgaagggtgcaaaggtcgaatgtgctaacgttccgttc
aagacacgcctgaaccgtacgaaccagggtcagttcggcatcgtaatctcagcatggggt
gctgacttcgcagatccgatttcattccttgacatgttcacgtcaaacaactcctataac
gcaggaaaatggaagaatgctcaatacgataatctgattgaagcatccaagtcaaccgat
gctggcaatgccgccaagcgttgggacgatttggtgaatgctgaaaagatccttatccaa
gaacaagggatttctcctttgtatcaacaagcaacggcttggatggttaagccaaaggtt
aagggtgtaatttacaactctgcaggtgcaaattacaactttaagaatacttacgtttca
ggcaactaa
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