Ligilactobacillus ruminis: LRC_05680
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Entry
LRC_05680 CDS
T01626
Name
(GenBank) Permease of the major facilitator superfamily
KO
K08217
MFS transporter, DHA3 family, macrolide efflux protein
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrm02000
]
LRC_05680
01504 Antimicrobial resistance genes [BR:
lrm01504
]
LRC_05680
Transporters [BR:
lrm02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-3 (12 spanner) (DHA3) [TC:
2.A.1.21
]
LRC_05680
Antimicrobial resistance genes [BR:
lrm01504
]
Gene variants
Macrolide resistance genes
Transporters
LRC_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Motif
Other DBs
NCBI-ProteinID:
AEN77865
UniProt:
G2SM93
LinkDB
All DBs
Position
complement(615979..617157)
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AA seq
392 aa
AA seq
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MNDLLSNVALSAFNIYTIWYLANVVQSQSAVALFGCAGFVEIVLASFGGRMSDLFPRINL
IRIGSVARMIALLVLIVMQKMSVSFTAVSVAVGCVLSFVTSFYLPAIETIAPAFSEDDDE
LIRNNASLNMVQQLATILGSALSGVLVLLKSALVSYGIILVIMVASCVMMLRIPSDSVSR
EETETDESMLDSLRQVVHLEVIRVLLPYATLINVSFWLYWYLTPMYLARRLPDFKAAYSI
QEMTIGITAGVSGFLFSHVVRDASRHLHGYAQWLVLQGVGIALFPLGAVFLTNQKVLLAL
LVVSWIVYGIANYMTGTIFVTIVQKKTATKMLGVTYGVVFSLFGAIAPLSSVFSPAFSSI
GPVGLLLLTLPMIVLPAVMMVDRRVNGLMRGV
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccttctgagcaatgtggccttgtctgcattcaacatatatacaatctggtat
cttgcaaacgtcgttcaaagccagagtgcagtcgccctgttcggatgcgcgggatttgtc
gagatagtcctggcgtcgtttggcggtcggatgtccgacctgtttccgcggataaatctg
ataagaatcggcagcgtggcaaggatgattgccttgcttgttcttatcgtgatgcagaag
atgtcagtcagtttcactgccgtttccgttgcggtcggttgtgtgctgagcttcgtcact
tcattttatcttcctgcaatcgagacgatagcccccgctttttccgaagatgacgacgag
ctcataagaaacaacgccagtctcaacatggttcagcagcttgcgacgattttaggttca
gctctttccggcgtgctcgtcctcctgaagagcgcccttgtctcatacggcatcatcctg
gtcatcatggttgcatcatgcgtcatgatgctcagaataccgtcggattcggtcagtcgt
gaggaaaccgaaactgatgaatccatgctcgattccctgagacaggtcgttcacctggaa
gtcatcagggttcttctgccgtatgcgacgctgatcaacgtcagcttctggctgtactgg
tatctcacgccaatgtatctggcaaggaggctgccggacttcaaggcggcatattccatt
caggaaatgacaatcggaatcactgccggtgtgagcggttttttattcagccatgtagtc
agggatgcttcaaggcacctgcatggctatgcacagtggctcgtcctgcagggcgtcggc
attgccctctttccgctcggcgcagtctttttgacgaatcagaaggttctgctggctctg
cttgtggtttcgtggattgtctacggcattgcaaactacatgacgggaacgattttcgtg
acaattgttcagaagaagaccgcaaccaaaatgcttggcgttacatacggagtcgtcttt
tcgctgttcggggcaattgcaccgctgtcatcggtcttcagccctgcattttccagtatc
ggtccggtcggactgcttcttttgaccctgcccatgattgtcctgccagcggtcatgatg
gttgacagacgggtcaacggattgatgcgcggagtgtag
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