KEGG   Ligilactobacillus ruminis: LRC_06320
Entry
LRC_06320         CDS       T01626                                 
Name
(GenBank) Conserved hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrm03019]
    LRC_06320
Messenger RNA biogenesis [BR:lrm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     LRC_06320
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_18 AAA_22 AAA_30 AAA_16 DUF5647
Other DBs
NCBI-ProteinID: AEN77928
UniProt: G2SMN0
LinkDB
Position
681877..682764
AA seq 295 aa
MHDSMQLVIVTGMSGAGKTVAMQSFEDLGYFCVDNMPPALMGKFWELIKESGKIKKVALV
IDLRSRAFYEEVVEMIRSLEDENGISAKIVFLDASDEELVARYKETRRSHPLAMDGRVLD
GIVREREILNEIKSKATLLIDTTRLSPRQLREEIFHNFETSENTAFHINVMSFGFKYGIP
IDADVVMDVRFLPNPYYVKELKEKNGLDDDVYEYVMNSEKTAEFYKQYISMLRYVIPGYV
AEGKTSLTIAIGCTGGQHRSVAIAQRIGEDLQSDGYTVNFNHRDMKKRKETVNRS
NT seq 888 nt   +upstreamnt  +downstreamnt
atgcatgactcaatgcaattagtgatcgttaccggaatgagcggtgccggcaagaccgtt
gcgatgcaaagttttgaagatttgggatatttttgcgtcgataacatgccgccggctttg
atgggcaagttttgggaattgatcaaagaatccggcaaaatcaagaaggtggcgcttgtg
atcgatctgcgttcgcgggcgttttatgaagaagtcgttgaaatgattcgcagcttggaa
gatgaaaacggcatcagcgccaaaatcgtctttttggacgcttctgatgaggaactggtt
gctcgctataaggaaacgagaagatcgcacccgcttgcgatggatggacgcgtgcttgac
ggcatcgtgcgcgaacgcgagattttaaatgaaatcaagtcaaaggccacgcttttgatt
gatacgacgaggctttctccgcgacagctgcgcgaagaaatcttccataattttgagact
agcgaaaacactgcatttcacatcaacgtgatgtcttttggcttcaaatacggcattccg
attgatgccgacgtcgtcatggatgtcaggtttttgccgaatccttactatgtcaaggaa
ttaaaggaaaaaaacggccttgacgatgacgtctacgagtatgtcatgaattccgagaag
actgccgaattttacaagcagtacatctcaatgctgcgctacgtgattccgggttacgtt
gctgaaggaaaaacgagcctgacgatcgcaatcggatgtactggcggacaacaccgttca
gtggcgattgcgcaacgaattggcgaagacttgcaaagcgatggatataccgtcaatttc
aatcaccgcgacatgaagaagcggaaggagacggttaatcgctcatga

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