Ligilactobacillus ruminis: LRC_06540
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Entry
LRC_06540 CDS
T01626
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRC_06540 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_06540 (ung)
Enzymes [BR:
lrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LRC_06540 (ung)
DNA repair and recombination proteins [BR:
lrm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRC_06540 (ung)
Prokaryotic type
LRC_06540 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEN77948
UniProt:
G2SMQ0
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All DBs
Position
706947..707636
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AA seq
229 aa
AA seq
DB search
MKTIIHNEWQEVLESEFESDYYAKLHAFLKNEYLSHTIYPDMYHIFEAFELTPFSDVKVV
ILGQDPYHGPNQAHGLSFSVFPGVDIPPSLRNIYKELESDLGIKPVKHGYLKKWAEQGVL
MLNSVLTVRNGQAFSHKGKGWERLTDAAIEKLSSRPGPVVFILWGRAAQDKISLIDTTKN
IVLKSAHPSPLSASRGFFGSRPFSKTNQALIAMGEEPIDWQLPETIDEL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacaattatccataacgaatggcaagaagtgctggaatcggagtttgaatctgat
tattatgcaaagttgcatgcctttttaaagaacgagtatttgagtcatacgatttatccg
gacatgtatcatatttttgaggcttttgaattgaccccgttttcagacgttaaagtggtc
attttgggacaggacccgtatcatggaccaaatcaggcgcacggattgagcttttcggtt
tttccgggcgtagatattccaccgtcattgcgcaatatctacaaagagctggaaagcgat
cttggaatcaagccggtcaagcacggttatctaaaaaaatgggccgagcaaggcgtgttg
atgctaaattctgttttaacggtcagaaacggacaggctttttcgcataaaggcaaggga
tgggaaaggctgacggatgctgcaatcgaaaaattgtcaagtcgtcccggacctgttgtc
tttattttgtggggacgtgccgcacaagataaaatcagtttgattgatacgacgaaaaat
attgttttgaaatcggcacatccaagtcctttgtcggcgagtcgcggcttttttggctcg
cgtccgttttcaaagaccaatcaggcattgatcgcaatgggagaggagccaattgattgg
cagcttcctgaaacgattgatgaactttaa
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