Ligilactobacillus ruminis: LRC_06570
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Entry
LRC_06570 CDS
T01626
Symbol
dnaQ
Name
(GenBank) DNA-directed DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03030
DNA replication
lrm03430
Mismatch repair
lrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRC_06570 (dnaQ)
03430 Mismatch repair
LRC_06570 (dnaQ)
03440 Homologous recombination
LRC_06570 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrm03032
]
LRC_06570 (dnaQ)
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_06570 (dnaQ)
Enzymes [BR:
lrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRC_06570 (dnaQ)
DNA replication proteins [BR:
lrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRC_06570 (dnaQ)
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRC_06570 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEN77951
UniProt:
G2SMQ3
LinkDB
All DBs
Position
complement(709198..709740)
Genome browser
AA seq
180 aa
AA seq
DB search
MNFVAFDFETANAKRNSACSLALTVVQNNQIVDELYSLINPKTNFDYRNIAIHGIKPQMV
ADSPDFSELWPHIESFFTPESLVVAHNAPFDCSVLTRTLEKYGIAAPHFNVIDTVKTSKQ
FYDFQDNKLDTLCQNLDIDLAHHHNALDDSQACAKILLSQLQNFGSDTLKSFIYKYPRKR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgttgcatttgactttgaaacggcaaatgctaaacgaaacagtgcctgttct
ttagcattgacggtcgttcaaaacaatcagatcgttgatgagctctactcgctcatcaat
ccaaaaaccaattttgattatcgaaatatcgccattcatggaatcaaacctcaaatggtt
gccgattctccggatttttccgaactgtggcctcatatcgaaagcttttttacgcctgaa
tcgctcgtcgttgcgcataatgcccctttcgactgcagcgtgctgacgcgcacgttggaa
aaatacgggatagctgcccctcattttaacgtcatcgataccgtcaagacaagcaagcaa
ttctatgatttccaagacaataagcttgataccctctgtcaaaatcttgacattgacctc
gcacatcaccacaatgccttggatgacagtcaggcatgtgccaaaattttgctttctcaa
cttcaaaattttggatctgatacattgaaatcatttatttacaaatacccgcgaaaacga
taa
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