Ligilactobacillus ruminis: LRC_07600
Help
Entry
LRC_07600 CDS
T01626
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm00230
Purine metabolism
lrm00240
Pyrimidine metabolism
lrm01100
Metabolic pathways
lrm01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LRC_07600 (nrdD)
00240 Pyrimidine metabolism
LRC_07600 (nrdD)
Enzymes [BR:
lrm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
LRC_07600 (nrdD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDD
Gly_radical
ATP-cone
PUMA_CC
Motif
Other DBs
NCBI-ProteinID:
AEN78045
UniProt:
G2SN82
LinkDB
All DBs
Position
812689..814854
Genome browser
AA seq
721 aa
AA seq
DB search
MIELKNDEKKVTKRPGSVIKRDGYRMPFASYKLKYIFSALGLEDQSDELIWSVINKFVDQ
DTVETAEIYDAVIATLKENNFDDEAESFITKHKVKEEEWQKQTDPTERLTRLQKKDPTLV
HENANKDSNVFNTQRDLTAGTVGKTLGLRLMPEHVAKAHLRGDIHYHDLDYTPWSPMTNC
CLIDFREMLTNGFKIGNAEVESPHSIQTATAQMSQIIANVASSQYGGCSADRVDEVLEPF
AMRNYEKHLAESRDYIENPEKQVEFAKKRTKKDIYDAMQALEYEINTLFSSQGQTPFTTL
GFGLGTSWISREIQKSILRIRIAGLGREKRTAIFPKLVFTLKKGLNLKPGDPNYDIKQLA
VECATKRMYPDVLMYDKIVELTGSFKAPMGCRSFLQGWKDDEGNEVNSGRMNLGVVTMNL
PRIALESNGDMDLFWEIFDERLDVCHTALKFKVKRVLDAIPENAPILYQYGAFGKRLKPG
EDVNELFKNERATVSLGYIGLYEVGTVFYGPNWEHNKEAHDFTLSIVKKLHDACVEWSAQ
SGYHYSVYSTPSESLTDRFCRLDTEKFGKIKDITDKEYYTNSFHYDVRKHPTPFEKLSFE
MDYPKYASGGFIHYCEYPNLRQNPKALEAVWDWAYDKVGYLGTNTPIDHCYKCGFQGEFK
ATERGFECPTCGNHDPKTCDCVKRTCGYLGNPLQRPMVHGRHVEISSRVKNMTERMAEDV
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgattgaattaaaaaatgatgaaaaaaaagtgacaaaaaggccggggtcggtcatcaag
cgcgatggatacaggatgccctttgcgtcatataaattaaaatatattttcagcgccctc
ggtttggaagaccaaagcgatgaattgatttggtcggttattaataaatttgtcgatcaa
gatacggttgaaacggctgaaatctatgatgcagtcattgcgactttgaaagaaaacaat
tttgacgatgaagctgaaagtttcatcactaaacacaaggtcaaggaagaagaatggcaa
aaacaaacggatcctactgaacgtttgacacgacttcaaaagaaggatccgacacttgtg
catgaaaatgccaataaggacagcaacgttttcaatacgcagcgcgatctgaccgcggga
acggttggcaaaacgcttggattgcgcttgatgcctgaacatgttgccaaagcacatctt
cgcggcgacattcattatcatgatcttgactatactccgtggagtccgatgacgaattgc
tgtctgattgatttcagagaaatgctgacgaacggatttaaaatcggaaatgcagaggtt
gaaagtcctcattcgattcaaactgcaacggcacaaatgtctcagattattgcaaacgtg
gcttccagtcaatatggcgggtgttcggcagaccgtgtggatgaggttcttgaaccgttt
gcaatgcgtaattatgagaaacatttggctgaatccagggattacatcgaaaatcctgaa
aagcaagtcgaatttgccaagaaaaggaccaaaaaagatatctacgatgcgatgcaggct
ttggaatacgaaatcaataccctgttttcgtcacaaggacagacgccgtttacaacgctc
ggatttggccttggaacttcctggatttctcgtgagattcaaaaatcgattttgagaatc
agaattgcaggactcggtcgcgaaaaacgtacggcaatttttccgaaactcgtttttacg
ttgaaaaaaggcttgaatctcaagcctggcgatccaaattatgacatcaagcagcttgcg
gttgagtgtgctacgaaacgcatgtatcctgacgttttgatgtatgacaagatagttgaa
ctgactggaagcttcaaagcaccgatggggtgtcgctcttttcttcaaggctggaaagac
gatgaaggaaatgaagtcaattcaggccgaatgaacctcggagtcgtgaccatgaacctt
ccgcgaatcgcacttgaatcaaatggcgacatggatcttttttgggaaatattcgatgaa
cgccttgacgtatgtcatactgcgctcaagttcaaagtcaagcgcgttttggatgccatt
cctgaaaatgctccgattctttatcaatacggtgcatttggcaagcgtctcaagccggga
gaagacgtaaatgagttgtttaaaaatgaacgtgcaacggtttcattgggctatatcggc
ctatatgaagtcggaacagtcttctatgggccgaactgggaacataacaaggaagctcat
gattttacgctgtcaatcgttaagaaattgcacgatgcctgtgtagagtggtctgcgcaa
agcggctatcattatagtgtttactcgactccaagcgagtcgctgacggatcgtttctgt
cggttggatactgaaaaattcggcaagattaaagatattacggataaggaatactacacg
aacagttttcattatgacgtcagaaagcatccgactccatttgagaagctttcattcgaa
atggactatccgaaatatgcttcaggcgggtttattcattactgtgaataccctaatttg
cgtcaaaatccgaaagctttggaagccgtttgggattgggcttatgataaggtcggctat
cttggaaccaatacgccgatcgatcattgctataagtgcggttttcaaggcgaattcaaa
gcgacggagcgcggctttgagtgtccaacgtgcggcaatcacgatccgaagacttgcgat
tgcgtcaaaagaacttgcggctatcttgggaatcctttgcagcgtccgatggtgcacgga
cgtcacgttgagatttcgtcacgcgtcaagaacatgaccgagaggatggctgaagatgtt
gaatga
DBGET
integrated database retrieval system
