KEGG   Ligilactobacillus ruminis: LRC_08340
Entry
LRC_08340         CDS       T01626                                 
Name
(GenBank) Geranylgeranyl pyrophosphate synthase
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
lrm  Ligilactobacillus ruminis
Pathway
lrm00900  Terpenoid backbone biosynthesis
lrm01100  Metabolic pathways
lrm01110  Biosynthesis of secondary metabolites
Module
lrm_M00364  C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    LRC_08340
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:lrm01006]
    LRC_08340
Enzymes [BR:lrm01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     LRC_08340
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     LRC_08340
    2.5.1.29  geranylgeranyl diphosphate synthase
     LRC_08340
Prenyltransferases [BR:lrm01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   LRC_08340
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-ProteinID: AEN78116
UniProt: G2SNF3
LinkDB
Position
885038..885943
AA seq 301 aa
MTMNNSELDNFQAEFLPLLNERMDVYLQQLNTRKTLHDSMSYSVDAGGKRIRPMIIMLVC
DSFKKKIDQDVLDVCASLEFVHTYSLIHDDLPAMDNDELRRGKATNHVVFGESMAILAGD
GLLTTAFECLGQTSISAKTKCTLMSRLAFAAGPQGMVNGQVGDIENEGVKLTLPQLRNVH
AQKTGALLRYAFESGGILAGVSDRALGELKELGNCFGLAFQIYDDIMDVVSTPEEMGKAT
HKDQSEHKNTYPGLLGLDGAYEELEKAKANAKAHLEVLAEEFGAKTMLLEELLNYFKAGK
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacaatgaataattctgaactggataattttcaagcagaatttttgcccttgttaaat
gaaagaatggacgtttatctgcaacagctcaatacgcgcaaaactcttcatgattcgatg
tcttattcggttgatgccggtggaaagcgcatcagaccgatgattatcatgctggtttgc
gattctttcaagaaaaaaatcgatcaagacgttttagacgtttgcgcatcgcttgaattc
gtgcatacttattcgttgatacatgatgatctgccggcaatggacaatgatgagcttcgg
cgtggaaaggcaacgaatcacgtagtctttggcgaatcgatggctattttggctggtgac
ggattattgacgacagcctttgaatgcttgggacaaacaagcatttccgcaaagacaaag
tgcacgctcatgagcaggttggcgtttgcagccggacctcaaggcatggtcaacggacag
gtcggggatattgaaaatgaaggcgtcaagctcacgttgcctcagcttagaaacgttcat
gcgcaaaaaaccggagctttgctcagatatgcatttgaatcaggcggaatacttgccggc
gtgtctgaccgggctttgggtgaacttaaagaacttggaaattgttttggactggcattc
caaatttatgacgatatcatggatgtcgtttcgactccggaagaaatgggaaaggccacg
cataaggaccagtcagagcataaaaatacctatcctggactgttgggtcttgacggagca
tacgaggaacttgaaaaagcaaaagcgaatgccaaagcgcatctggaagtgctggcagaa
gaatttggcgcaaaaacgatgttgcttgaagagttattgaattattttaaagcaggtaag
aattag

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