Ligilactobacillus ruminis: LRC_08750
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Entry
LRC_08750 CDS
T01626
Name
(GenBank) conserved hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRC_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrm03019
]
LRC_08750
Messenger RNA biogenesis [BR:
lrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LRC_08750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TusA
Motif
Other DBs
NCBI-ProteinID:
AEN78156
UniProt:
G2SNJ3
LinkDB
All DBs
Position
complement(923812..924600)
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AA seq
262 aa
AA seq
DB search
MENICLDPTDASEMHEKDHVFFTHLTTELIHLLPVLPEKCTAFTTQEIYKLLQKLNRYCE
LGLDFPKNLKILPYDYPLNLKNLRVTAKASDDGWFGACVLLLEDENEKIGYAKRFVAHGL
HKKRIKKWKQFFRDQALSSLILGKDLIENKDSLLPDFKKIAKELENLEEGAEVSTNFSLY
DPESLAKLNDLCQKTGHRLLLTPLQTNIAKSFFPFDDFETGTDSDVLIADLRQTFDVVCE
TQSPSEIDDLIKIIVPREVRYC
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacatctgtcttgatccgacggacgcaagcgagatgcacgaaaaagaccatgtc
ttctttacgcatctgacgaccgaactgattcatctgctgcccgttttgcctgaaaaatgc
acagcgttcacgacacaagagatttacaagctgcttcaaaaactgaatcggtactgcgag
cttggacttgattttccaaaaaacctgaaaatcttgccttacgactatccgctgaacctt
aaaaatcttcgcgtcactgccaaagcaagcgacgacggctggtttggcgcatgcgtcttg
cttttggaagacgaaaacgaaaagatcggctatgcgaaacgcttcgttgcgcacggcctg
cataaaaaacgaatcaaaaaatggaaacagttcttcagagatcaagctttgagctcattg
atcctcggcaaagatctgattgaaaacaaggactcgctcttgcctgatttcaaaaagatc
gcaaaagaactcgagaatcttgaagaaggcgctgaagtttcaacgaatttttctctttat
gatccggaatctttggccaagctgaacgatttgtgtcaaaaaacaggacaccggctgctt
ttgactcctcttcaaacaaacattgccaagtccttctttccgtttgacgatttcgaaacg
ggaaccgacagcgacgtgctgatcgccgacttgcgccagacatttgacgtcgtgtgcgaa
acgcaaagcccaagcgaaatcgacgacctgatcaaaatcatcgttccaagagaagtcaga
tattgctaa
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