Ligilactobacillus ruminis: LRC_08780
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Entry
LRC_08780 CDS
T01626
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm00300
Lysine biosynthesis
lrm00470
D-Amino acid metabolism
lrm01100
Metabolic pathways
lrm01110
Biosynthesis of secondary metabolites
lrm01120
Microbial metabolism in diverse environments
lrm01230
Biosynthesis of amino acids
Module
lrm_M00525
Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRC_08780
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRC_08780
Enzymes [BR:
lrm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LRC_08780
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
AEN78159
UniProt:
G2SNJ6
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All DBs
Position
926473..927780
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AA seq
435 aa
AA seq
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MQLADSVEVNEQGHLLIGGVDAVKLAEKYGTPLIAYDVRKIKKQIRGFKQAFEDAGVKYM
VSYASKAFSALAMYQLINKYGLGCDIVSGGELYAALKGGMPPERIEFHGNNKLQDELEMA
VDEKIGTIVVDNFREIKLLDHILRRKHANIGVVLRVTPGIEAETHQYIMTGQSNSKFGFD
IRSGQAEEALQQLMKNPRMNLMGIHCHIGSQIFAVNGFLMAAEKLVEVLADWKKRFGYEA
DVLNLGGGFGIRYNDFDQPLPAEEFVSAIVERVKELVAKYELKMPEIIIEPGRAMVGEAA
TTLYTIGSRKDVDGVCHFLAVDGGMGDNIRPALYDAHYEAYLADRPNALREQMVTVVGKY
CESGDVLVHDCALPNTKPGDILAMPSTGAYGYTMASNYNRNPRPAVVFCEDGKSRLVVRR
ETYADMMACELGLED
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttggcagattcagttgaagtaaacgaacagggacatttgttgataggtggggtc
gatgctgtcaaattggccgaaaagtacggcactccgctgatcgcatacgacgtcaggaaa
attaaaaagcagattcgcggattcaaacaggcttttgaggatgccggcgtcaaatacatg
gtttcgtatgccagcaaggctttttccgcgcttgcgatgtatcagctgatcaacaagtac
gggctcggctgcgacatcgtttccggcggcgagctttatgcggcattaaagggtgggatg
ccgcctgaacgcattgaatttcacggaaacaacaagcttcaagacgagcttgaaatggca
gtcgatgaaaaaatcggcacaatcgtcgtcgacaacttccgcgagatcaaactgctcgat
cacattttgcgccgcaagcatgcaaacatcggcgtcgttttgcgcgtcacgccaggcatt
gaagccgaaacgcatcagtacatcatgaccgggcagtcgaattccaaattcgggtttgac
atccgttcaggtcaagcagaagaggcgctgcagcagctgatgaagaatccgcggatgaac
ctgatggggattcattgccacatcggctcgcagatttttgccgtcaacggtttcctgatg
gcggcagaaaagctggtcgaagttttggccgactggaagaagcgtttcggctacgaagca
gacgttttgaaccttggcggcgggttcggcattcgctacaacgatttcgatcagccgctt
ccggccgaagaattcgtatccgcaatcgtggaacgcgtcaaggaactggtcgcaaaatac
gagctcaagatgcctgaaatcatcatcgaacccggtcgcgccatggtcggtgaagccgca
acgacgctttacacgatcggttcgcgaaaggacgtcgacggcgtctgccactttttggcc
gttgacggcggaatgggcgacaacatccgccctgcgctttacgatgcgcattacgaggca
tatcttgccgatcggccgaacgcgttgcgcgagcagatggtcaccgttgtcggcaagtac
tgcgagtcgggcgacgttttggtccatgactgcgccttgccgaacaccaagccgggagac
atcctggccatgccgtcgaccggtgcctacggttatacgatggcctcaaactacaaccgc
aatccgcggcctgccgtcgttttttgcgaagacggcaagtcaagactcgttgtcagaaga
gaaacgtatgccgacatgatggcgtgcgaactaggcttggaagactaa
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