Ligilactobacillus ruminis: LRC_09350
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Entry
LRC_09350 CDS
T01626
Name
(GenBank) DeoR family transcriptional regulator
KO
K22103
DeoR family transcriptional regulator, carbon catabolite repression regulator
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrm03000
]
LRC_09350
Transcription factors [BR:
lrm03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LRC_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_5
GntR
HTH_20
HTH_PafC
HTH_23
FaeA
HTH_28
Mga
FeoC
MarR_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEN78214
UniProt:
G2SNQ1
LinkDB
All DBs
Position
985101..985853
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AA seq
250 aa
AA seq
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MSQEKRIELIKQLLEERQELSTKDIMEEFGVSQDTARRDIVLLTKRGEVKRTHGGILPLD
FGKSVPNFQSRLSQFTKQKTQIANEAAKYFKPHNVYFVDASTILLKTCQTINMPLTVITH
SLDNCIALSEHNKVTVKVLSGTLNHENRYFYSNLAVEELADVVFDTAFIAASGIDETGAY
LLDQGDAQIVGTAVKRARKVILVAEHQKFINKSYYRICPLDKISMFITDKQPTKEQLAMF
SPYTEIKVAK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaggaaaaaagaatcgaactcattaaacaacttctcgaagaacgtcaggaactt
tctaccaaagacattatggaggaattcggcgtttcgcaggatactgcgcgtcgggacata
gtgcttttaacgaagcgaggtgaggtcaagcgaactcatggtggcattttgcctctggat
tttggcaagagcgtacccaattttcaaagtcgattgtcacaatttactaaacaaaaaacg
caaattgcaaatgaagcagccaaatatttcaagccgcacaacgtctactttgtcgatgcg
tcaacaattcttttaaaaacttgtcagacgattaatatgcctttaacggtcattactcat
tcgcttgacaattgcatcgcgttgtctgagcacaacaaagtaacggttaaagttttaagc
ggaactctgaatcatgaaaatcgttacttttattcgaacttggccgtggaagagctagcc
gatgtcgtgtttgatacggccttcattgcagcatccgggattgatgaaaccggtgcatat
ctgctcgatcaaggcgatgctcagattgtcggaacggcagtcaagcgtgccagaaaggta
attttggttgctgagcaccaaaaattcatcaacaagtcttattatcgaatttgtccgttg
gataaaatttcgatgtttatcacggacaagcagccgacaaaagagcagcttgcgatgttt
tcgccttatacggagattaaagttgcaaaataa
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