KEGG   Ligilactobacillus ruminis: LRC_09550
Entry
LRC_09550         CDS       T01626                                 
Symbol
gyrB-1
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lrm03032]
    LRC_09550 (gyrB-1)
   03036 Chromosome and associated proteins [BR:lrm03036]
    LRC_09550 (gyrB-1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrm02048]
    LRC_09550 (gyrB-1)
Enzymes [BR:lrm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     LRC_09550 (gyrB-1)
DNA replication proteins [BR:lrm03032]
 Prokaryotic type
  DNA Topoisomerases
   LRC_09550 (gyrB-1)
Chromosome and associated proteins [BR:lrm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    LRC_09550 (gyrB-1)
Prokaryotic defense system [BR:lrm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    LRC_09550 (gyrB-1)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: AEN78234
UniProt: G2SNS1
LinkDB
Position
complement(1003473..1005509)
AA seq 678 aa
MGTENYSDDSIQVLKGLEAVRKRPGMYIGSTDAKGLHHLVYEIVDNAVDEALSGFGKEID
VTIHKDDSITVVDNGRGLPVGIHAMGIPTVEVIYTVLHAGGKFGQGGYKTSGGLHGVGAS
VVNALSEKLTVNTVRDGIEYEEDFVDGGHPVGTLRKIGKAKKQSGTTVTFKPDKKIFSTT
HFNYDTLAERLRESAFLLKGVKIILTDERNDDQDVFLFENGIQEFVSYLNEEKDTLGNVM
YFEGKKDGIEVEVAAQYNDGYSETIMSFVNNVRTKDGGTHEVGMKSAWTKAFNEYARKVD
LIKSKDKNLEGSDVREGLSCVVSVRIPEELLQFEGQTKGKLGTPEARTAVDGIVNEQLGY
YLMENGDFAKELVRKSLKAREAREAARKARDESRNGKKRHKKERLLSGKLTPAQSKNAKK
NELFLVEGDSAGGSAKQGRDRKFQAILPLRGKVLNTEKAKLQDIVKNEEINTMIYTIGAG
VGTEFNIEDANYDKVIIMTDADTDGAHIQTLLLTFFYKYMRPMINAGRVYIALPPLYKLQ
KTVKKKTIVKYAWTDAELKTAEKEIGKGFTLQRFKGLGEMNADQLWETTMNPETRTLVRI
KIEDDALAEKRVSTLMGDRVEPRRKWIEKNVKFTLEEDGSLLDTAVAASAHGDASSKEDQ
EIAQKSLSLFDDDLDENI
NT seq 2037 nt   +upstreamnt  +downstreamnt
atgggtactgaaaattatagcgatgattccattcaggttctgaaaggacttgaagctgtc
agaaaaagaccggggatgtacattggttcgactgatgccaaagggttgcatcatttagtc
tacgaaatcgttgataatgcggttgatgaggcactctctggatttggaaaagaaattgac
gtgacgattcacaaagatgattcgattacggttgtcgacaacggtcgaggtcttcccgtc
ggaattcatgcgatggggattccgaccgttgaagtcatttatacggtgcttcatgccggt
ggaaaattcggacaaggcggatataaaacctcaggcggacttcacggggtcggtgcttcc
gtcgtcaatgccttatctgaaaaattgaccgtaaataccgttcgtgacgggattgaatac
gaagaagactttgttgatggcggacatcccgttggaactttgcggaaaatcggtaaagcc
aaaaagcaaagcggaacgaccgtcacgtttaaacctgacaaaaagattttctcgacaacg
cattttaattatgacacgttggctgaacgcttgcgcgaatcggcattcctcttgaaaggc
gttaaaattattttgaccgatgaaagaaacgatgaccaggacgtctttttatttgaaaac
gggattcaggaatttgtttcctaccttaatgaagaaaaagacacgcttggaaacgtcatg
tactttgaaggcaaaaaggacggcatcgaagtcgaagttgccgcacagtataatgacggc
tattctgaaacgatcatgtcatttgtcaacaacgtgcgcacaaaagacggcggcacgcac
gaagtaggaatgaagtccgcttggaccaaagccttcaacgaatacgcaagaaaggtcgat
ctgattaagtcaaaggacaaaaacctcgaaggaagcgacgtcagagaaggtttgtcctgc
gtggtttccgtcagaattccggaagaacttcttcaattcgaaggacagacaaagggcaag
ctcggaacgccggaagcaagaaccgccgttgacggaattgtcaatgaacagcttggatac
tacctgatggaaaacggcgattttgccaaagagctcgtgcgcaaatcgctaaaggcaaga
gaagcaagagaagcggccagaaaagcgcgcgatgaaagccgaaacggcaagaaacgccac
aaaaaggagcgactcctttcaggcaagctgacaccggctcaatcaaagaatgccaagaaa
aacgagcttttcttagtcgaaggggattctgccggcgggtctgccaaacagggacgtgat
cgcaagtttcaggcaattttgccgttgcgcggcaaggttttgaacacggaaaaggcgaaa
cttcaagatatcgtcaaaaacgaagaaatcaataccatgatttatacgatcggtgccgga
gtcgggaccgagttcaacatcgaggacgcaaattatgacaaggtcattatcatgaccgat
gcggataccgatggcgcgcatattcaaacgttgcttttgacgtttttttataaatacatg
cgaccgatgatcaatgccggaagagtctacattgcgcttccgccgttgtacaagcttcaa
aaaacagttaaaaagaagaccatcgtcaagtatgcctggaccgatgcagaacttaaaacg
gccgaaaaagaaatcggaaaaggctttacgcttcaacgattcaaagggttgggcgagatg
aacgccgatcagctttgggaaacaactatgaatcctgaaacgagaactttggtcagaatc
aaaattgaggacgatgcattggccgaaaaacgcgtttcaactctgatgggagaccgtgtt
gagccaagacgaaaatggattgaaaaaaacgttaaatttacgcttgaagaagacgggagc
ctgcttgatactgccgttgccgcatctgctcatggggatgcctcaagcaaagaagatcaa
gaaattgcacaaaagagtctgtcactgttcgatgacgacttggatgaaaacatttag

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