Ligilactobacillus ruminis: LRC_09640
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Entry
LRC_09640 CDS
T01626
Name
(GenBank) tRNA (uracil-5-)-methyltransferase Gid
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrm03016
]
LRC_09640
03036 Chromosome and associated proteins [BR:
lrm03036
]
LRC_09640
Enzymes [BR:
lrm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
LRC_09640
Transfer RNA biogenesis [BR:
lrm03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
LRC_09640
Chromosome and associated proteins [BR:
lrm03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LRC_09640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
NAD_binding_8
DAO
Pyr_redox_2
3HCDH_N
AlaDh_PNT_C
FAD_binding_2
FAD_oxidored
Pyr_redox
HI0933_like
FAD_binding_3
Thi4
NAD_binding_2
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AEN78242
UniProt:
G2SNS9
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All DBs
Position
complement(1012881..1014191)
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AA seq
436 aa
AA seq
DB search
MEKCVNVVGAGLAGSEAAWQLAKRGIKVRLYEMRPKKNTPAHHTGNFAELVCTNSLRANQ
LTNGAGLLKEEMRQLDSLIMKAADENSVPAGGALAVDRDAFSGEITKTLHENENITVIEE
ELKELPQGLTVIATGPLTSDSLADSIKEFMGDEGLYFYDAAAPIVEKASLDMDKVYLKSR
YDRGDAAYLNCPMTEEEFENFYNELINAETAELHAFENERFFEGCMPIEQMASRGKKTML
FGPLKPVGLEDPRTGKEPYAVVQLRQDNAVGDLYNIVGFQTHLKWGEQKRVFSMIPGLEN
AQFVRYGVMHRNTYLRSPEFLKDTYQTKKRSDLLFAGQMTGVEGYVESAASGLYAGINAA
RLIEDKDPLVFPVETMMGAMAHYITHASAKNFQPINANFGIVPRLSQKIRDKRERNLALS
KRALDILDKYKLENEL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatgcgttaacgtggtcggagcaggacttgccggaagcgaggcagcttggcag
ctggctaaaaggggcatcaaagtaagactttacgagatgcgaccgaaaaagaacacaccg
gctcatcatacgggaaattttgcagaacttgtctgtacaaattctttgcgggccaaccaa
ttgactaacggagcaggacttttgaaagaagaaatgcgacagcttgattctttgataatg
aaagccgctgatgaaaacagcgttcctgccggtggggctttggcagttgatcgtgatgct
ttttccggcgaaatcacaaaaacgctgcatgaaaatgaaaatattacggtcatcgaagaa
gaactcaaggaattgccgcaggggttgacggtcattgcgacaggtccgttgacttcagac
tcgcttgcagattcaatcaaagagttcatgggtgatgaaggactttatttctatgatgcg
gccgcaccgatcgttgaaaaggcttcgcttgacatggacaaggtttatctcaaatcacgt
tatgatcgcggggatgctgcttacctcaactgtccgatgacggaagaagaattcgaaaat
ttctacaatgaactgattaatgctgaaactgccgaactgcatgcctttgaaaacgaaaga
ttctttgaaggatgcatgccgattgaacagatggcgtcacgcggcaagaaaacgatgctg
tttggcccgctgaaacctgtcggattagaagatcccagaaccggcaaagagccttatgcg
gtagttcaattgcgccaagataatgccgttggtgatttgtataacattgtcggttttcag
actcatctcaaatggggagaacaaaagcgcgtcttttcaatgattcccggtttggaaaat
gcacagttcgttcgctacggcgtcatgcacagaaacacttatcttcgttcgcctgaattc
ttaaaagacacctaccagacgaagaaacgctcagatttgctttttgcaggtcagatgact
ggcgtcgaaggttatgtcgaaagcgctgcaagcgggctttatgccgggatcaatgccgct
cggttgattgaagacaaagatccgttggttttcccagttgagacgatgatgggggcaatg
gctcattatattacgcatgcaagtgccaaaaacttccaaccgatcaatgccaactttgga
atcgtgccgcgtctttcgcaaaaaattcgcgacaagcgcgaaagaaatctggcgttatcc
aaacgagctttggatattcttgacaagtacaaattggaaaacgaattataa
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