KEGG   Ligilactobacillus ruminis: LRC_09940
Entry
LRC_09940         CDS       T01626                                 
Name
(GenBank) CRISPR-associated Csm5 family protein
  KO
K19140  CRISPR-associated protein Csm5
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrm02048]
    LRC_09940
Prokaryotic defense system [BR:lrm02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    LRC_09940
SSDB
Motif
Pfam: RAMPs Pol_BBD PHD_like
Other DBs
NCBI-ProteinID: AEN78271
UniProt: G2SNV8
LinkDB
Position
complement(1040301..1041344)
AA seq 347 aa
MKDYHTKFDFTLLVLGPVHIGSGEKYTKKEYVYENNKYYFPDMGRLYLRIKDEPGLNSAF
TAFMTEINDGSRTTTLGEFLSANSILDRDFGGYSISESGYEFEKSSGRSWNSRNREPGAG
RNLNEISAFVKDSYGRPYIPGSSLKGAIRTILINEKFKTDDVPWKDGDNIFNEIRISDSK
PISVDNLTLVQKWDYNAKKNCSNSLPIWRESLKPLTRIEFTITTSSERARKLIENLSHYA
KSFYQRYKNKFLSAYPDRVIQKNIDCPIYLGAGSGLWTKVDYHHVRIDKIQEKSYKKMKM
KGNGVLKLARYKKVKIKTKDGKSIHLTNDVFYEMGKCGFSIKEVDVG
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgaaggattatcatactaagtttgattttactctgcttgttctaggacctgtacatatc
ggatcaggggaaaagtatacaaaaaaggaatatgtatatgagaacaataaatattatttt
ccggacatgggcagactttatctgagaataaaggacgaacctggacttaacagtgccttc
actgccttcatgactgaaatcaacgacggaagtagaacgaccacattaggagagtttctt
tcggccaacagcattttggaccgggatttcggcggatattctatctctgaatcaggatac
gaatttgaaaagtcatccggaagaagctggaacagccggaatcgggaacctggtgccggg
cgcaacctgaatgaaatctctgcatttgtcaaggattcatacggcaggccatatattccc
ggaagttcactgaagggcgcaatcaggacgatactcattaatgaaaagtttaaaacggat
gatgttccttggaaggatggggataatattttcaatgaaataaggatttctgacagtaag
ccaataagcgttgacaatctgactctggttcaaaagtgggactataatgctaaaaagaat
tgctcaaattcgcttccgatttggagagaatctttgaaaccgttgacacgaattgaattc
acgattacaacttcaagtgaacgtgcaaggaaactgatagaaaatttgagccattatgct
aaaagtttctatcaacgatataaaaataaatttctgagtgcgtaccccgacagagttatt
cagaaaaacatcgattgtccgatttatcttggtgcaggaagcggactatggacaaaagtt
gattatcaccatgtaagaattgataaaattcaagaaaagtcgtataaaaaaatgaagatg
aaaggtaatggggttttaaagcttgcacgatataagaaggtgaaaattaaaacgaaagat
ggcaaatctattcatttaactaatgatgttttctatgaaatgggaaaatgcggtttcagc
ataaaagaagttgatgttgggtga

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