KEGG   Ligilactobacillus ruminis: LRC_09950
Entry
LRC_09950         CDS       T01626                                 
Name
(GenBank) CRISPR-associated protein, Csm4 family
  KO
K19139  CRISPR-associated protein Csm4
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrm02048]
    LRC_09950
Prokaryotic defense system [BR:lrm02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    LRC_09950
SSDB
Motif
Pfam: Csm4_C RAMPs Fim1F_C
Other DBs
NCBI-ProteinID: AEN78272
UniProt: G2SNV9
LinkDB
Position
complement(1041325..1042245)
AA seq 306 aa
MTFKIYRMSFQRAHFGKGYLDTSDMLFDASRLYSALCLEAIKNDCLNEFTELAESDGFFL
SDAFPHVGEPYFPKPVCYPKKRMVRLEGLKEDNEKNKLTDRIVAVPMSEMSAFIRGEADY
SVLFEDQEGFCRSSIVVRKGEDPYEVGVTTFSQDVYVLATQSELLDELMTSLQYSGLGGK
RSSGYGRFDLAIEELPEGLEEMLNTDGNEQMLLTTALPQDAELHQAMTGARYDLKKSSGF
AYSETAGQLVRKQDLYKFRAGSVFVNKFKGQIADVRPDGYPHPVYNFAKGLFLDLKGVRE
NEGLSY
NT seq 921 nt   +upstreamnt  +downstreamnt
atgacatttaaaatatacagaatgagctttcagcgcgctcacttcggaaaggggtatctt
gatacgagtgacatgctgtttgatgccagccgtctgtacagtgctctttgtcttgaggca
attaaaaatgactgtctgaatgaattcactgaactggctgaatccgatggattcttcctc
agtgatgcctttcctcatgtcggagaaccgtattttccaaagccggtgtgttatccgaag
aaaaggatggtcagacttgaaggcctgaaggaagacaacgagaaaaacaagctgacggac
aggatagttgcagttccgatgtctgagatgtctgcattcatcaggggtgaggcagattat
tccgttctcttcgaagaccaggagggtttctgcaggagcagcatcgttgtcagaaagggt
gaagatccttatgaagtgggagtaacgacattcagtcaggatgtctatgtccttgcaacg
cagagcgaacttcttgatgaactgatgaccagccttcagtacagcggacttggcggcaag
cgttcaagcggatacggaaggttcgaccttgcaatcgaggaacttcctgaaggactcgag
gaaatgcttaataccgacggcaatgaacagatgcttctgacaactgcacttccgcaggac
gccgaattgcatcaggcaatgaccggtgcaagatatgacctgaagaagagcagtggcttt
gcgtacagcgagactgcaggtcagctagtgagaaagcaggatttgtacaaattcagagca
ggcagtgtctttgtcaataagttcaaggggcagattgcagatgtccgtccggacggatat
ccgcatcccgtctacaattttgcgaagggcttgtttttagatctcaagggggtaagggaa
aatgaaggattatcatactaa

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