KEGG   Ligilactobacillus ruminis: LRC_09990
Entry
LRC_09990         CDS       T01626                                 
Name
(GenBank) CRISPR-associated RAMP superfamily protein
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrm02048]
    LRC_09990
Prokaryotic defense system [BR:lrm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    LRC_09990
   Subtype I-D factors
    LRC_09990
SSDB
Motif
Pfam: CRISPR_Cas6 Cas_Cas6_C
Other DBs
NCBI-ProteinID: AEN78276
UniProt: G2SNW3
LinkDB
Position
complement(1045627..1046394)
AA seq 255 aa
MKKLLLKCRRECDIDDCRESVYLHGWLMNHLDDDFASELHQAGMNPLSIQVVHDEESVSF
IINLLTGKACNEVEPLIMSDSRNMIRINSGNQHEFEIIEKAVFERSESDLSKIFYGNDCS
KVLKLKIMTPTAFKTNGKYVFLPDVRLVFQNLMKKYGCAFEKGEDIDFELLDEICSKVEV
AAFSLKSRRFYLHKAYVNGFQGYLTLVCHGSQTLTNYIAMLLKFAEYSGIGVKTSMGMGA
VRILEGVDNVGKKNE
NT seq 768 nt   +upstreamnt  +downstreamnt
atgaagaaattactcttgaagtgcagacgcgaatgcgacattgatgattgcagggaatcg
gtatatcttcatggatggcttatgaatcatcttgatgatgacttcgcttcggagttgcat
caggcgggaatgaatccgctgtcaattcaggttgttcatgatgaagagtcagtgtcattc
atcattaacctgcttacagggaaagcatgcaatgaggttgaacctctgatcatgagtgat
tcacgcaacatgatacgcattaacagcggcaatcagcatgaatttgaaatcattgaaaag
gctgtatttgaacggagcgagtctgatctttcgaaaattttctatggaaacgactgcagt
aaggttctcaagttgaagatcatgacgccgacggccttcaagaccaacgggaaatacgtg
ttcctgcctgacgtacggcttgtctttcagaacctgatgaagaagtacggctgtgctttt
gagaagggtgaggacattgattttgaactgcttgatgaaatctgcagcaaggttgaggtt
gccgcattcagcctcaagtcacggcgcttctaccttcataaggcatatgtgaacggcttt
caggggtacctgacgttggtctgccatggaagccagacattgactaattacattgcgatg
ctgctgaagtttgcggaatattccggcattggcgtcaagaccagcatgggcatgggagcg
gtcaggattttggaaggagttgataatgttggaaaaaagaatgaatga

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