KEGG   Ligilactobacillus ruminis: LRC_10250
Entry
LRC_10250         CDS       T01626                                 
Name
(GenBank) putative crispr-associated protein cas6
  KO
K19091  CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
Organism
lrm  Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:lrm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lrm02048]
    LRC_10250
Prokaryotic defense system [BR:lrm02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    LRC_10250
   Subtype I-D factors
    LRC_10250
SSDB
Motif
Pfam: Cas_Cas6_C Cas6_I-A
Other DBs
NCBI-ProteinID: AEN78300
UniProt: G2SNY7
LinkDB
Position
complement(1076416..1077162)
AA seq 248 aa
MRYRLPILLMLKDQSKEPLLDISYQAKMLSLVKRGLSGTNPELFHKMYDENVQKKFAMSV
YFPYSKIENKKIILSSDGPNAVLYFSTADNKLALEFYNAFIWLNHQGVFSFDKNLNCKIG
KLSIVNEPVILTEKVLIKTMSPLVVRDDNGRFLSCITDDDVNDYNSALKHITSMKLSGSN
LCNLVDGLVISPIRTKKTVIKPFDIFIEATTGIFEINGNPTLIDRMIKEGIGEKCGSFAG
LCKVMEKV
NT seq 747 nt   +upstreamnt  +downstreamnt
atgagatatcgtttacctattttgttaatgttaaaagatcagagtaaggaaccgttattg
gatatttcttaccaggcaaaaatgctgtcattggtaaagaggggattgtcaggaacaaat
cctgaattgtttcataagatgtatgatgaaaatgttcaaaaaaagtttgctatgagcgta
tattttccatattccaaaatagagaataaaaagataatacttagttcagatgggccaaat
gcagtgttatatttttcaactgcggacaataaattggcattagaattttataatgcattt
atttggctaaatcatcaaggagtattttctttcgataaaaatcttaactgcaagatagga
aaattgtctatcgtaaacgagcctgtgattttgacagaaaaagttctaattaaaacaatg
tcacctttagttgttagggatgataacggaaggtttttatcatgcataactgatgatgat
gttaatgattataatagtgctttgaaacatattacttccatgaaattgtcaggtagtaat
ttgtgtaatttggttgatgggctagttatttcaccaattagaacaaagaaaactgttatt
aaacctttcgacatatttattgaggcaacaactggcatttttgaaattaacggcaatcct
acattgatagataggatgattaaagaaggcattggtgaaaaatgcggtagctttgctgga
ttgtgcaaagtaatggagaaggtgtaa

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