Ligilactobacillus ruminis: LRC_10880
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Entry
LRC_10880 CDS
T01626
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRC_10880 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_10880 (mutM)
Enzymes [BR:
lrm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LRC_10880 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LRC_10880 (mutM)
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRC_10880 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_8
RNHCP
Auto_anti-p27
DZR
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
AEN78357
UniProt:
G2SP44
LinkDB
All DBs
Position
complement(1136789..1137619)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETVRRGLNRLIKGKTIKDVNVLYDKIIVGSKDEFCKKLSGKKLLDVDRRGKYL
LFRFSGELTMVSHLRMEGKYFVRRKGEPVEKHTHVIFYLMDGSELHYNDVRKFGRMELFK
TGEETTLSGISKLGPEPTEKNFDSQKFYEGLQKKKKPIKTALLDQTLVAGVGNIYADEVL
YMAKIHPLTPCNELSRKQADCLRNSIIDELEKAIEKGGTTIRSYANAFLEEGSFQFFLQV
YGKTGEKCGRCGTPIEKIVVGQRGTHYCPNCQVMKK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagttgaaacggtcagacgtggccttaacagactgatcaagggc
aaaacgattaaggacgtcaatgttttatatgacaagataatcgtgggttccaaggatgaa
ttttgcaaaaaactcagcgggaaaaaattgcttgatgtcgatcgacgcggaaaatatctg
ttatttcgcttttcaggcgaattgacgatggtttctcacttgagaatggaaggaaaatac
tttgtcaggcgaaaaggagagccggttgaaaagcacacgcacgtgatcttttatttgatg
gacggaagcgagcttcattataacgacgttcgcaaatttgggaggatggaactgtttaag
acaggtgaagaaaccactctttccgggatttctaagcttggtcccgaaccgaccgagaaa
aattttgattctcaaaaattctatgaaggacttcaaaaaaagaaaaagccgattaagacg
gctctgcttgatcaaacgcttgttgcaggggtcgggaatatttatgctgatgaggtgctt
tatatggcaaagattcatcctttgacgccttgcaatgagctcagcagaaagcaggccgat
tgtttgagaaattcaatcatcgatgagcttgaaaaagcgatcgagaaaggcgggacgacg
atcaggagctatgccaacgccttccttgaggaaggatcatttcagttctttttgcaagtc
tatggaaagactggtgaaaagtgtggacgatgcggtactccgattgaaaaaatagtcgtc
ggacagcgcggtacgcattattgcccgaattgtcaggtgatgaaaaaatga
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