Ligilactobacillus ruminis: LRC_10890
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Entry
LRC_10890 CDS
T01626
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03030
DNA replication
lrm03410
Base excision repair
lrm03420
Nucleotide excision repair
lrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRC_10890 (polA)
03410 Base excision repair
LRC_10890 (polA)
03420 Nucleotide excision repair
LRC_10890 (polA)
03440 Homologous recombination
LRC_10890 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrm03032
]
LRC_10890 (polA)
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_10890 (polA)
Enzymes [BR:
lrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRC_10890 (polA)
DNA replication proteins [BR:
lrm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LRC_10890 (polA)
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LRC_10890 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRC_10890 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
BCAS2
Motif
Other DBs
NCBI-ProteinID:
AEN78358
UniProt:
G2SP45
LinkDB
All DBs
Position
complement(1137629..1140286)
Genome browser
AA seq
885 aa
AA seq
DB search
MTEKQKLLLIDGNSITFRGFYALFMQTERFVNHDGLHTSAVFSFKRMLDKILDDVNPDKI
LVAFDAGKKTFRTEKYSDYKAGRKKTPEELSEQFPYVKKLLDCYGIKHYELKNYEADDII
GTMSKEAEKHGYETTIVTGDRDLTQLVTNQTTVALTVKGVTEIEYYTPNHLSEKLGISPS
QITDLKGLAGDTSDNYPGVSKVGEKTALKLLNQYGTIENLYEHIDEFKKSKMKEHLIEDK
EIALTCKNLATIRRDAPLEIGLADIDFAGKDIEKLREFYQSMDFHKFLSELNDKKSEEVS
NEEELPSIVELTFENIDGQRLNADNASFYLELADENYHTSPFWGFALLTDGQCYVSKDVS
LLKREPLREFLENKNKTLDVFDGKKTYVSLKRLGIEAESIDFDLLLVSYLLNNTDNSNDL
GQLCQKQGYFGVKSDDEVYGKGAKKEICADETFFEHLRSKVFAIAFLKQKLMQKLKDNSQ
DHLYFEIERPLSIVLAKMEIAGIKADKETLETMGSRFKEKISDLESLIYQEAGETFNINS
PKQLGMILFDKLGLPGAKKTKTGYSTAVGVLEKLRGNDIVDNVLLYRQFAKLKSTYIDGL
IKVMDQDEKVHTRYTQTLTTTGRLSSVEPNLQNIPVRLEEGRKIRQAFIPSHQGWEIFSS
DYSQIELRVLAHISKDENMQKAFKDDFDIHANTAMKIFGLSSPDEVTPNMRRQAKAVNFG
IVYGISDFGLAQSIGCRRDQAKTFMETYFESFPGVKRYMTEIVELARNQGYVETLFKRRR
YLEGIRSKNFNQRSFAERTAMNTPIQGSAADIIKVAMIKMQETLEKEELKARMLLQVHDE
LIFEAPEEEIPVLEKLVPSVMDSAVKLDVPLKVESGHGKTWFDTK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaacaaaaactactcctgattgacggcaatagtattacgtttaggggtttt
tatgcattgtttatgcaaacggaacgtttcgttaaccatgacggtcttcatacgagcgcg
gttttttcatttaaaagaatgctcgacaaaattttggatgacgtaaatcctgataaaatc
ctggttgcgtttgatgctggcaagaagacttttcggactgaaaaatacagtgattacaag
gccggcagaaaaaagacgccagaagaattgtcggaacagtttccttatgtcaagaagctt
cttgactgctacggaatcaaacattatgaattgaaaaattacgaagcagacgacataatc
ggaacgatgtcaaaggaagccgagaaacatggttatgaaacaacgatcgtgaccggcgat
cgagatttgacgcagcttgtgacgaatcaaacgacggttgctttgactgttaaaggcgtt
acggaaatagaatattacacgccaaaccatttgagtgaaaagcttggcatctcgccctct
caaattaccgatctcaaaggacttgcgggtgatacttcggataattaccccggggtgtcc
aaagttggcgaaaagacggcactaaagcttttgaatcagtacggaacgattgaaaatctt
tatgaacatattgatgaattcaaaaaatcaaagatgaaggaacatttgatcgaagacaaa
gagattgcgctgacgtgcaaaaatctggcaacgatcaggcgtgatgctccgcttgaaatc
gggttggccgatatcgattttgcaggcaaagacattgaaaaattgcgagagttttatcaa
agcatggattttcataaatttttgagcgaactgaatgataaaaaatccgaagaagtctca
aatgaagaagaacttccttcgatagtcgaattgacttttgaaaacattgatggtcagcgg
ctaaacgctgataatgctagtttttatcttgaacttgccgatgaaaactatcatacctct
cctttttggggatttgcgcttttgaccgatggtcagtgctatgtttcaaaagacgtttcc
ttgttaaaaagagaacctttaagagaatttcttgaaaataaaaataagactcttgacgtg
tttgacggaaagaaaacttatgtctcgctcaaacgtttgggaattgaagcagaatcaatc
gattttgacctgttattggtatcttatcttttgaataataccgacaacagcaacgatttg
gggcagctttgccaaaaacaaggctattttggcgtaaaaagcgatgatgaagtttatgga
aaaggtgctaaaaaggaaatttgcgctgatgagacgttttttgagcatttgagaagcaaa
gtttttgcgattgcctttttgaaacaaaaattaatgcaaaaattaaaagataattctcaa
gatcatttatattttgaaatcgaacgcccgctttcaatcgtgctcgctaagatggaaatt
gccggaatcaaagccgacaaagagacgcttgaaacgatgggaagtcgtttcaaagaaaag
ataagcgatcttgaatcattgatttatcaagaagccggagaaacattcaacatcaattca
cctaagcaattgggaatgattttgtttgacaaactagggcttccaggtgccaagaagaca
aagaccggctattcaacggcagtcggtgtcttggaaaaactcagaggaaacgatatcgtt
gataacgtgcttttatatcgtcaatttgccaagctcaagtcgacttacattgacggactc
atcaaagtgatggatcaagatgagaaggtgcacacgcgctacacgcaaacgttgacgaca
acgggaaggttgtcttcggttgaacccaaccttcaaaacatccccgttcgcttggaagaa
ggaagaaaaatcaggcaggctttcattccgagtcaccaaggatgggaaattttttcatca
gattattcgcaaattgagttgagggtcttggcacatatttcaaaagacgagaatatgcaa
aaagcatttaaagacgattttgatattcatgccaatacggcgatgaaaatttttggattg
agcagtcctgacgaggtaacgccgaatatgcgtcgtcaggctaaagccgtcaattttgga
atcgtctacggaatcagtgactttggacttgcacaaagcatcggatgcagaagagatcag
gctaaaacgtttatggaaacgtattttgaatcttttcccggcgttaaaagatatatgacg
gagattgtggagcttgcaagaaatcaaggatacgttgaaacgcttttcaaacgtcgccgc
tatcttgaagggattcgttcaaaaaattttaatcagcgttcgtttgctgaaaggacggct
atgaatactccgattcagggaagtgctgctgatattatcaaggttgcgatgattaagatg
caggagacgcttgaaaaagaagaacttaaagccagaatgcttttacaggttcatgacgaa
ctgatttttgaagcgcctgaagaagaaattcccgtgcttgaaaaacttgttccgagcgtg
atggattctgcagttaagttggatgttccgcttaaagttgaaagcggacatggcaaaaca
tggtttgatacgaaatga
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