Ligilactobacillus ruminis: LRC_11830
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Entry
LRC_11830 CDS
T01626
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrm03032
]
LRC_11830
03036 Chromosome and associated proteins [BR:
lrm03036
]
LRC_11830
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_11830
DNA replication proteins [BR:
lrm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LRC_11830
Chromosome and associated proteins [BR:
lrm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LRC_11830
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LRC_11830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
AEN78443
UniProt:
G2SPD0
LinkDB
All DBs
Position
complement(1233893..1234168)
Genome browser
AA seq
91 aa
AA seq
DB search
MANKAQLIETVAEKTGLTKKDATVAVDAVFGSIQDFLEKGDKVQLIGFGNFEVRERAARK
GRNPQTGAEIEIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagcacaattgatcgaaactgttgcagaaaagacaggtttgacaaaaaag
gatgctactgttgcagttgacgccgtttttggttcaattcaagattttcttgaaaagggc
gataaggttcaattgatcggttttggcaactttgaagtacgcgaacgtgcagcacgcaaa
ggtcgcaatccgcaaacgggcgcagaaatcgaaattcctgcaagcaaggtgccggcattt
aagcctggtaaagctcttaaggatgcagttaaataa
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