Ligilactobacillus ruminis: LRC_12070
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Entry
LRC_12070 CDS
T01626
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrm03019
]
LRC_12070
03009 Ribosome biogenesis [BR:
lrm03009
]
LRC_12070
03036 Chromosome and associated proteins [BR:
lrm03036
]
LRC_12070
Enzymes [BR:
lrm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LRC_12070
Messenger RNA biogenesis [BR:
lrm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LRC_12070
Ribosome biogenesis [BR:
lrm03009
]
Eukaryotic type
90S particles
RNase
LRC_12070
Prokaryotic type
rRNA processing factors
LRC_12070
Chromosome and associated proteins [BR:
lrm03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LRC_12070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
AEN78466
UniProt:
G2SPF3
LinkDB
All DBs
Position
complement(1257304..1257996)
Genome browser
AA seq
230 aa
AA seq
DB search
MIIGLTKKLKDDYGINVKNAELFDEAFTHASYVNEHPKEHLKYYERIEFLGDAVMQLCVS
EYLFKRYPSLPEGKLSRLRAAMVCEDSFSKFAKECHFDEYIRLGKGEEKANARNRPSLLC
DIFESFIGALYLDQGKDKVVEFISAVVFPKLDMGWFDHLLDHKTELQEYLQQNGDCKIEY
KMLDEKGPDNDKTYTMAVYADGKKIGEGVGSSKKNAEQAAAYQALKVAKQ
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgataatcggtttaacaaaaaaattaaaggatgattacggaatcaacgtcaagaatgcg
gaactgtttgatgaagcattcacgcatgcatcatatgtcaacgagcatcctaaagaacat
ttgaaatattatgaacgaatcgaatttcttggagatgcggtcatgcagctttgcgtttcg
gagtatttgttcaaacgttacccttctttgccggaaggaaaactttcaagactgcgcgcg
gcaatggtttgtgaagacagcttcagcaaattcgccaaagaatgtcattttgatgaatat
attcgcctgggcaaaggtgaagaaaaagccaacgccaggaatcgaccatcgcttttatgc
gatatttttgaatcttttatcggtgctctgtatttggatcaaggaaaagacaaggtcgtt
gaattcatcagtgccgttgtttttccgaaacttgacatgggctggtttgatcatcttctt
gatcataagacggaacttcaagaatatctgcaacaaaacggtgattgcaaaatcgaatac
aagatgttggatgaaaaaggcccggacaacgataagacatatactatggccgtttacgcc
gacggcaaaaaaatcggtgagggtgtcggttcctcgaaaaaaaatgctgaacaggcagct
gcatatcaagcattgaaagttgccaagcagtaa
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