Ligilactobacillus ruminis: LRC_12240
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Entry
LRC_12240 CDS
T01626
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LRC_12240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrm03021
]
LRC_12240
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_12240
Enzymes [BR:
lrm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LRC_12240
Transcription machinery [BR:
lrm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LRC_12240
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LRC_12240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AEN78483
UniProt:
G2SPH0
LinkDB
All DBs
Position
complement(1275496..1275711)
Genome browser
AA seq
71 aa
AA seq
DB search
MILYPSVDELLERVDSRYSLILLASKRAHELDAGASPMLEESEYKSVKNVGRALEEVVAG
KLRIKSEGQEG
NT seq
216 nt
NT seq
+upstream
nt +downstream
nt
atgattttatatccatcagtcgatgagttgcttgaacgcgttgattcgcgctattcgctt
attttgcttgcttccaagcgtgcgcatgaactggatgccggtgcatccccgatgcttgag
gaaagcgaatataagtcagttaaaaacgttggtcgtgctttggaagaggtcgtggccgga
aaactcaggattaaatctgaaggtcaagaaggataa
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