Ligilactobacillus ruminis: LRC_12780
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Entry
LRC_12780 CDS
T01626
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LRC_12780 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrm03016
]
LRC_12780 (trmU)
Enzymes [BR:
lrm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
LRC_12780 (trmU)
Transfer RNA biogenesis [BR:
lrm03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
LRC_12780 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Arginosuc_synth
ATP_bind_3
DUF7411
Asn_synthase
Motif
Other DBs
NCBI-ProteinID:
AEN78535
UniProt:
G2SPT3
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All DBs
Position
complement(1331463..1332590)
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AA seq
375 aa
AA seq
DB search
MTDNSRIRVVVGMSGGVDSSVCAYLLKRQGYDVVGVFMKNWDEKKDSGVCTVTEDYQDVA
KVANEIGIPYYSVNFEKEYWDGVFTYFLDEYRHGRTPNPDVMCNKEVKFKAFLDYAMELD
ADYIAMGHYAQIKRDDDGTVHLMRGADQNKDQTYFLSQLSGKQLEKAMFPIGGMQKSEVR
EIAKKAGLATADKKDSTGVCFIGERNFSKFLSEFLPAKPGKMMTFEGEYKGEHFGLMNYT
IGQRRGLGIGGDGKSNEPWFVVGKDLKTNTLYVGQGYHNEHLYATSLDATKLSFVAPIED
RGQSFHCTAKFRYRQKDSGVTVNFNDERNKVEVVFDNPVRAITPGQEIVFYDGEECLGSG
TIDHAYQNGRLLQYV
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacagataacagcaggattcgggtcgttgtcggaatgagcggcggcgtagactcgtct
gtttgtgcgtatttgctcaaacgtcaaggctatgacgttgtcggcgtctttatgaaaaat
tgggacgaaaaaaaagacagcggcgtttgtacggtgacggaagattaccaagatgttgcc
aaggttgctaacgaaatcggtatcccgtattattcagtcaactttgaaaaagagtactgg
gatggtgtcttcacgtatttcttggatgaatatcgtcacggcagaacgccaaatccggac
gtcatgtgcaataaagaagtcaaattcaaagcctttttggactatgcaatggaactggat
gctgactatattgcgatgggacattacgctcaaatcaagcgtgatgatgacggaaccgtg
catttaatgagaggtgctgatcaaaataaggatcagacgtattttttgagccaactgtca
ggcaaacagcttgaaaaagcaatgtttccgattggaggcatgcaaaaatcggaagtgcgc
gaaattgccaaaaaagcaggcttggcaacggctgataaaaaagattcaacgggtgtttgt
tttattggcgaaagaaacttcagcaaatttctgagtgaatttttgcctgcaaaaccaggc
aaaatgatgacctttgaaggcgaatataaaggtgaacatttcggtttgatgaattatacg
attggacagcgtcgcggacttggaatcggtggcgacggcaagtcaaacgagccgtggttt
gtcgtcggaaaagatttgaaaacgaatactctgtacgttggtcagggatatcataatgaa
catctttatgcaacgagccttgatgcaacgaaactgagctttgtggcaccgattgaagac
cgcggacaaagttttcactgcaccgcaaaattcagatatcgccaaaaagattccggcgtt
acagtgaatttcaacgatgaaagaaacaaggtcgaagtagtctttgacaatccggtcaga
gcaataactcccggacaggaaatcgttttttatgacggtgaagaatgccttggaagcgga
acgattgatcacgcttatcaaaatgggcggcttttgcaatacgtgtag
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