Ligilactobacillus ruminis: LRC_13450
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Entry
LRC_13450 CDS
T01626
Symbol
iscS
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm00450
Selenocompound metabolism
lrm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
LRC_13450 (iscS)
Enzymes [BR:
lrm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
LRC_13450 (iscS)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
LRC_13450 (iscS)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
AEN78597
UniProt:
G2SQ71
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All DBs
Position
complement(1406975..1408201)
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AA seq
408 aa
AA seq
DB search
MNEICRDFPILNQIVNDERLVYLDNAATSQKPKEVIDAVSNYFLRDNANVHRGVHTLAER
ATEQFEQTRFKVKNLINAKSEREIVYTKGTTEGLNWVAVSFGTQVVKSGDEIVVSYMEHH
SNIVPWQILCEKTGAKLKYVKLTKNGELDFEDAKEKITAKTKIVSIAQASNVMGVVNPIK
ELAKLAHENGAYMVVDGAQSLPHMKVDVQDLDVDFLAFSGHKMLGPTGIGILFGKMELLE
RMSPLEYGGEMIDFVELDHSTFKEVPWKFEGGTQNIAGVIGLGAAIDYLQDVGYEEIEKK
EHELVEYVLPKLLQIDGLTVYGPKEPDKHTGVISFNLDGIHPHDVATALDMEGVAVRAGH
HCAQPLMKYLKIPATVRASFYFYNTKADADQLIKAILATKEFFKHGTI
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaatttgcagagatttcccgattttgaatcagattgtaaatgatgaacgtctg
gtttatcttgacaatgcggcaacgtcgcaaaagccaaaagaggttatcgatgccgtcagc
aattactttttaagagacaatgcaaacgttcaccgtggcgttcatactttggctgagcgc
gcgactgaacaatttgagcagacaagatttaaagtaaagaacttgattaatgccaaaagc
gaacgcgaaatagtctataccaaagggacgaccgaaggattgaactgggttgctgtttcg
tttggaacacaagttgtcaaatcaggcgatgagattgtcgtttcctacatggaacatcat
tcaaacatcgttccctggcagattttgtgcgaaaaaacgggtgccaaactaaagtatgtc
aagttaacgaaaaatggcgaacttgattttgaagatgccaaggaaaaaattacagcgaag
acaaaaatcgtatcaatagctcaggcgtcaaacgttatgggagttgtcaatcccatcaag
gaattggcaaaattggcgcatgaaaacggagcttatatggttgtcgatggtgcgcagtcc
ttgccgcacatgaaagttgacgttcaagatctggatgttgatttcctggctttttccggt
cataagatgcttggtccgactggaatcgggattctttttggaaaaatggaattgcttgaa
cgaatgagtccgcttgaatacggtggtgaaatgattgactttgtcgaattggaccattca
acttttaaagaagttccttggaaatttgaaggaggaacccaaaatattgcaggcgtcatc
gggttaggtgccgcaatcgactacttgcaagacgtggggtatgaggaaattgaaaaaaaa
gagcatgagctggttgagtacgtgttgcccaagcttcttcaaattgatggtctgactgtt
tatggccctaaggaaccagataagcataccggcgtgatttcattcaatcttgacggaatt
cacccgcatgacgtcgcaaccgcgcttgatatggaaggcgtggcagtcagggccgggcat
cattgcgctcagcctttgatgaagtatctgaagattccggcaacggtcagagcaagtttt
tatttttacaatactaaagctgatgcggatcaactgataaaagcaattttagcaacgaag
gagttcttcaaacatggcactatctag
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