Ligilactobacillus ruminis: LRC_14220
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Entry
LRC_14220 CDS
T01626
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LRC_14220 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrm03400
]
LRC_14220 (ruvB)
Enzymes [BR:
lrm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRC_14220 (ruvB)
DNA repair and recombination proteins [BR:
lrm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LRC_14220 (ruvB)
RecFOR pathway proteins
LRC_14220 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_16
TIP49
NB-ARC
nSTAND3
AAA_22
AAA_14
AAA_3
Sigma54_activat
RNA_helicase
MCM
AAA_25
Bac_DnaA
IstB_IS21
Sigma54_activ_2
NPHP3_N
AAA_24
NACHT
AAA_18
TsaE
NTPase_1
DUF815
ABC_tran
AAA_PrkA
AAA_28
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AEN78673
UniProt:
G2SQM6
LinkDB
All DBs
Position
complement(1474630..1475637)
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AA seq
335 aa
AA seq
DB search
MTEDKRIVSGENLDASEQADLTLRPKTLKTYIGQEKIKRELSVYIAAAKQREESLDHVLL
YGPPGLGKTTLACIIANEMQVGIKTTTGPAIEKPGDLVALLNELEPGDVLFIDEIHRLPK
NVEEILYSAMEDFYIDIIVGQDSSAHPVRFPLPPFTLVGATTRAGMLSAPLRARFGIVGH
MNYYEDDELTRIVQRSAAVFAAQISADGAFEIARRSRGTPRVANRLLKRVRDFAEVAHKD
EIDTQIVCYALDLLRVDQCGLDDTDRRLLRTMIELYGGGPVGLATLAANIGEETETVADM
IEPYLMQRGFIKRTPRGRMVTPLAYKHLNLKIDNN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagacaagcgaatcgtttcgggagaaaatcttgacgcaagcgaacaagccgac
ttgacgcttcgtccaaagactttgaaaacatatatcggacaagaaaaaatcaaacgcgaa
ctttccgtttatattgcagcagcgaaacaacgggaagaatcgcttgaccatgttctttta
tacggtcctcccggcttaggcaagaccacgctcgcctgcatcattgccaatgaaatgcag
gtcggcatcaaaacgacgaccggtccggcaattgaaaagcctggcgatttggtggcgctt
ttgaatgaactggagcctggtgacgttttgttcatcgatgagattcatcgtcttcccaaa
aacgttgaggaaattttatattcggcgatggaagacttctacatcgatattatcgtcgga
caggattcgtcggctcatccggtcagatttccgttgccgccgtttactttagtcggggca
accacgagagccggaatgctttctgcacctctaagggcacgttttggaatcgtcggtcac
atgaattattacgaagacgatgagctgacgcggatcgttcagcgttcagcagctgttttt
gcggctcagatcagtgctgacggagcgtttgaaatagcgagacgttcgcgcgggactccg
cgcgtcgccaatcggcttttgaaacgcgtgagagattttgccgaagttgcgcataaagat
gagattgatacgcagatcgtgtgctatgctctggatttgcttagagtcgaccagtgcggt
ctggatgacacggatcgcagacttttgagaacaatgatcgaattatacggcggaggtccg
gtcggactggcgactttggccgccaatatcggcgaagaaacggaaacggtcgctgatatg
atcgaaccatacttgatgcagcgcggtttcatcaagcgaactccaagaggtcgcatggtg
acgccactcgcatacaagcatttgaacttgaaaattgataataattga
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