Ligilactobacillus ruminis: LRC_14460
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Entry
LRC_14460 CDS
T01626
Symbol
lysM
Name
(GenBank) Autolysin
Organism
lrm
Ligilactobacillus ruminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
Glucosaminidase
LysM3_LYK4_5
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM_OapA
Motif
Other DBs
NCBI-ProteinID:
AEN78697
UniProt:
G2SQQ0
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All DBs
Position
complement(1498171..1500348)
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AA seq
725 aa
AA seq
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MKKRKERIEREKQVQALQNIRSVKKATTYIGTTVLMGTAGFALSSRTKVSADTVQVDKNG
QTNGNQQASSQSSSDDTQQSASSSSESQNNTVGQTQRAEQQAQQTTQQPAAQNQQTQQQS
IQTDQTEQDPQTETQADVSTQQAVADVPMVRAVQANTSYSGNVQSFLNNVAPAARQVASA
RGLYASLMIAQAALESGWGGSYLSTAAYNLFGVKWNGSGAYINLSTQEYYGGAYHTVMAR
FQRYSSYTESLNAYADLICSHFPRSTKAQASSYAVAAQNLRNGVYGTYATDPSYASKLIS
VIERYNLTQYDTGTVMKPVSNNTNSNNNNNSNTSVATNGTYTAVAGDSLWGIAHKFGMTL
DELKKANGLTSNNLYVGQTLKVRKSAQQNTNNETNQNQNSNGNNNDRPQQTVTSAETYTV
KSGDSLWGIATKHGCNVNDLKSWNHLSSNLIHVGQKLVIGQKKSTVQQQQGKKEPQQTTG
NETYTVKSGDSLWKIATNHNMSVSQLKNLNKLSNDMIFVGQKLVVSEKKQSAPSQNQNKP
SQNQVTKPSTYTVKSGDSVWKISHEHGMSMDELKSLNGLKDNLIIPGQVLKIKGTSSDTK
QKIKTSSKETAEAGATYVVKSGDSLWAVANKQGLTVAELKRINGLSSDTIYVGQRLKVTQ
KSSVNAKTYAKTTNVSDKSKKKYTVKAGDSLWRIAADNKTTVNNLKAVNHLASDTIYVGQ
TLYLN
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaaaagagcgaatcgaacgtgaaaagcaggtccaggcattgcagaatatc
cgatctgtaaaaaaggctacgacctatattgggaccactgttttgatggggaccgccggt
tttgcgctaagcagcaggaccaaggtttcggctgatacggttcaagttgataagaacggt
caaacaaacggaaatcagcaggcttcaagtcagtcatcttctgatgatacgcagcaatca
gcgtcatcttcgtcagagtctcaaaataatacggtcggacaaacgcagcgtgccgaacag
caagcacagcagacaactcagcagcctgctgctcaaaaccaacagacccagcagcaatcg
attcagacagatcaaacagagcaggatcctcaaaccgagactcaggccgacgtcagcacc
caacaggcagttgccgacgttccgatggtaagggcggttcaggcgaatacgagttattca
ggaaacgtgcagagctttttaaacaacgttgctccggcagcacgtcaagttgcaagcgcc
agaggcttgtatgcatcattgatgattgcgcaggcggcccttgaaagcgggtggggcgga
agctatctgtcgactgctgcttataatttgtttggcgtcaagtggaacggatccggtgcg
tatatcaatctgtcgacgcaagaatattatggcggtgcgtaccatacggtaatggcacgt
tttcagcgttattcaagctatacggaatcattgaatgcttatgccgatttgatttgcagt
cattttccgcgttcgaccaaggctcaggcttcgagttacgccgtggccgcgcaaaatttg
cgcaacggcgtctatgggacatatgcaaccgatccgagttatgcatcaaagctgatttcc
gtgattgaaagatacaatttgacgcaatatgataccggaactgttatgaaaccagtttcg
aataatacgaacagcaataataacaataattcaaatacaagcgttgccacgaacggaact
tacacggccgttgccggtgacagcttgtgggggattgcgcacaaattcgggatgacgctt
gatgagttgaagaaggcaaacggcttgacgagcaacaatctctacgtgggtcagacgctc
aaggtcagaaagtctgctcaacaaaatacgaataacgaaacgaatcaaaatcagaattcg
aacggcaacaataatgatcgtcctcagcagacggttacgagtgccgagacatatacggtc
aagtcaggcgacagcttgtggggcatagcaaccaaacacggctgcaacgtaaatgatttg
aagagctggaatcatctttcatcaaatttgatccatgtcgggcaaaaactcgtcattggt
cagaaaaaatcgaccgttcagcagcaacaaggaaaaaaagaacctcagcagacgacgggc
aatgaaacttatacggtcaagtcgggcgacagtctctggaaaattgcgacgaatcataac
atgagcgtatctcagcttaaaaatttaaacaagctttccaacgatatgatttttgtcgga
caaaaattggtcgtatccgagaaaaagcaaagcgcaccgtcacaaaatcaaaataagccg
tcacaaaatcaggtaaccaagccttcgacttacacggtcaaatcaggcgacagcgtttgg
aagatttcgcatgaacatggcatgagcatggatgaattgaagtcgctgaacggcttaaaa
gacaacctgattattccgggacaggttttgaagattaagggaacttcttcagataccaag
caaaaaatcaagacaagctcaaaggaaacggcagaagcgggtgcgacatacgtcgtcaaa
tcaggcgacagtttatgggcagtagccaacaagcaagggttgacggttgcagaattgaag
cgaatcaacgggctgtcttctgatacgatttatgttggtcaaaggcttaaagtgacgcag
aaatcttccgtaaatgcgaaaacgtatgctaagacgactaatgtttctgataagtccaag
aaaaaatacacggttaaagccggcgacagtttatggcgaattgcggctgacaataagacg
accgtcaataatttgaaggccgtaaaccacttggcaagcgatacgatttacgtgggtcag
acgctgtatttaaattag
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