Ligilactobacillus ruminis: LRC_15500
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Entry
LRC_15500 CDS
T01626
Name
(GenBank) Transposase
Organism
lrm
Ligilactobacillus ruminis
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_Tnp_ISL3
DUF6930
Motif
Other DBs
NCBI-ProteinID:
AEN78796
UniProt:
G2SR59
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Position
complement(1604680..1605903)
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AA seq
407 aa
AA seq
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MRKDVYERMRYFVLEKIKPNYSAVARQYDVDPRTVKAAYLRAQSDKTSVVRKRRSRRSKL
DGYQDIIEDKYAAGCSARSIYDFIVEKGFTGKYTIVKDYGRRFRKAQTKKATIRVEHTIG
LSAQVDWKEQVTMTDRNGVSHTFSIFLYVLPYSKFKFLKLTLDQKQDTLFKCLFEAFKAT
GGIPKEIWFDNMSTVVDHKLIDFHHHRFNERFLSFSHDAGFHPIACRPFRPQTKGCVEAL
ARTMGRLKPYDGEFCTINDLNDIVNRLAKRLNHEKSQSNNRKPVELWAKEKEHFRPLNYD
LTRYFDSVQTRKVSQDSMIRFQNHQYSVSPNYIGKEVEIKPDTDGKSIRIFYQGSEIKKH
DLTNKQFNYDSRDKHAIFKSDLMEGKTDEEIDQYMLNNLSIYDQIGE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagacgtttacgaaaggatgagatattttgtgttagagaagataaaaccaaat
tactccgctgttgcacgacaatatgatgttgatccaagaaccgtcaaagcggcatattta
agagctcagagcgataaaacatcagttgtcaggaagcgtcgtagccgtcgcagtaagctg
gacggatatcaagacatcattgaagacaaatacgctgcaggttgttctgccagatcgatt
tatgactttatcgttgaaaaaggctttaccggcaagtacacaatcgttaaagattatggt
cgtcgttttcgtaaagcacaaacaaaaaaggcaacgattagagttgagcatacaattgga
ttaagtgctcaagttgattggaaagaacaggtcacaatgaccgatcggaacggtgtttca
catacattcagtattttcttatatgtcttgccttattccaaattcaagtttttaaaacta
accctggatcagaaacaggatactttattcaaatgtttatttgaagcctttaaggctacc
ggtggaattcccaaagagatttggtttgataatatgtcgactgtcgttgaccataaatta
attgactttcaccatcatcgatttaacgaacgatttttatcatttagtcatgatgcggga
tttcatccaatcgcttgtcggccatttaggccgcaaaccaaaggctgcgttgaagcattg
gcaagaacgatgggacgactgaagccttacgatggagagttctgtaccattaatgacttg
aatgatatcgttaatcgattagccaaacgcctaaatcacgagaagtcacaaagcaataac
cggaagccggttgaattatgggcaaaagaaaaagagcatttccggcctctcaattacgat
ctcacaagatacttcgacagcgtccaaaccagaaaagtatcgcaagactcaatgattaga
tttcaaaaccatcaatactctgtctcccctaattatatcggaaaagaggttgaaatcaaa
ccggatactgatggtaaatctatccgtatcttctatcaaggatctgaaatcaagaaacac
gatttaaccaataaacagtttaattacgattctcgtgataaacatgccatttttaaaagt
gatttgatggaaggcaaaacggatgaagaaatcgatcagtatatgcttaataatctcagc
atttatgatcagataggggaataa
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