Ligilactobacillus ruminis: LRC_17080
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Entry
LRC_17080 CDS
T01626
Name
(GenBank) putative bacteriocin ABC transporter ATP binding protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm02010
ABC transporters
lrm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRC_17080
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRC_17080
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrm01002
]
LRC_17080
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrm02000
]
LRC_17080
Peptidases and inhibitors [BR:
lrm01002
]
Cysteine peptidases
Family C39
LRC_17080
Transporters [BR:
lrm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LRC_17080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
Guanylate_cyc_2
RsgA_GTPase
SbcC_Walker_B
AAA_22
RNA_helicase
DUF87
NTPase_1
nSTAND3
AAA_18
ABC_ATPase
Peptidase_C39_2
ATP-synt_ab
AAA
AAA_16
Sigma54_activat
AAA_29
AAA_28
AAA_24
MMR_HSR1
AAA_25
Cytidylate_kin
PRK
Motif
Other DBs
NCBI-ProteinID:
AEN78950
UniProt:
G2SS02
LinkDB
All DBs
Position
1762947..1765016
Genome browser
AA seq
689 aa
AA seq
DB search
MIFSKKYPYIPQVDEMDCGIACLSMIAKYYGSEYHLSYLRNLAKITKNGASAWGLMKAAE
KIGLTTDSFELDYDNLCNFPELPLIAFVVKEGGISHFCVIYQVTESYVLVADPDPTVKMV
KISKRSFEKIWTGVIITCHKGDDFKINHVNSKNLLSFIPVLMEEHQTIVKIFVTAIFIAT
VNIISSYFLQELIDYYIPKQNINLLDIVSAGLIICYIFQQITLFFQQKLLLKLSNSLSKS
IVLKYWGYIIKLPMSFFETRKTGEITSRFSDANTLIEVLGETIVTICLDSIIVISILFFI
FHQNVTLFCISLCIIPLYILLIYAFSTYFKKENYNLMQSYSEVDSSIIDNITGIETIKSL
CLEDFSYSHAKFKYTNYIQKYVNYTNHVNMQNCLKNLIQLIFNVIILLIGARMIHTTSLT
IGKLMTFNALLGYLVSHLEGIISLQTKIQAANIANIRLNEVYSVEQEDNYGNEYLGNVES
IEVNNLCYSYDYGDNTINNLTMIINKGDKIAICGESGTGKSTLAKLLAREILPDYGNILV
NGICTEEYNIKSYRHKIIYIPQETTLFPGTISDNITIGLNDSFYSSKKIQHLCDLIDFSK
DIRELPNGINTQVNSNGSGLSGGQKQKLALIRVMVRNPQVIILDESLSAIDSKSRNKILK
FLTEKPDLTIISITHDKETLPYFKRIYNM
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgatattcagtaaaaaatacccttatattccacaagttgatgaaatggactgtggcatt
gcctgcctttcaatgatagctaaatattacggttctgaatatcatctttcatacttgcga
aatctcgccaaaataacaaaaaacggtgcaagtgcttgggggttaatgaaggcagcagaa
aaaataggcttaacgacagattcttttgagcttgattatgataatctctgcaactttcca
gaacttcctttaattgccttcgtagtaaaagaaggaggaatcagtcatttttgcgtaata
tatcaagtcactgaatcatatgttctagtagctgaccctgatccaacggtaaagatggtc
aaaatttccaaacgttcttttgaaaaaatatggaccggtgtcatcattacatgccataaa
ggtgatgatttcaaaataaaccatgtaaattctaaaaatttattatcatttattcccgtt
ttgatggaagagcaccaaacaattgtgaaaattttcgttaccgcaatatttatcgcgacg
gttaatattatcagctcatattttctacaagaattgatagattattatattccaaaacaa
aacatcaaccttcttgatattgtttctgcagggttgataatatgctacatatttcaacaa
attactctgttttttcaacaaaaacttcttttaaaactgagtaattcactttccaaatca
atcgttttgaaatattgggggtacataatcaaattgccaatgtctttttttgaaacaaga
aaaacaggcgaaatcacttcaagattttctgatgcaaatactcttatagaggtattgggg
gaaactatcgtaactatttgcttggattcaataatcgtaatatcgattctttttttcata
tttcatcaaaacgtcactcttttttgcatatctttgtgtatcattccgctctatattttg
ctgatatatgctttctcaacgtacttcaaaaaagaaaattacaatctcatgcaatcttac
tcagaagtagactcatcaatcatcgataatattactggaatagaaacgataaaatcgctt
tgcttggaagatttttcctattctcatgcaaaatttaaatacacaaattatatccaaaaa
tatgttaactacacgaatcatgtcaacatgcaaaattgcttaaaaaatttgatacagctg
atttttaacgtcatcatactattgattggtgcaaggatgatacataccacttcgctgaca
atcggaaaactgatgactttcaatgctttgctaggatacctagtgtcgcatctcgaagga
ataatatcattgcaaaccaaaatacaggccgccaatatagctaatatccgtttaaacgaa
gtatattctgtcgagcaagaagacaactatggaaacgaatatctaggaaatgttgaatca
atagaagtcaacaatctgtgctacagctatgactacggcgataatacgataaataactta
acgatgatcataaataaaggggataaaattgctatttgcggtgaaagcgggactggcaaa
tctactttggccaaattgcttgcacgcgaaatacttccagattatggtaatattctcgta
aacggaatttgtacagaagagtacaacataaaaagttacaggcataagataatttatatt
cctcaagaaacgactctatttcctggaaccatttcagataacatcacaatcgggctcaat
gattctttttattcttcaaagaaaatacagcacctttgtgatttaatcgacttctccaaa
gacattagggaacttccaaatggtattaacactcaagtgaactcaaacggttcaggatta
tcaggaggtcaaaagcaaaagcttgctttaattcgcgtaatggttagaaacccgcaagtt
attatactcgatgaatcattatcagccatcgattcaaaaagtagaaataaaatactgaaa
tttctgactgaaaaacctgatctgacgataatctcaattactcacgataaagaaacctta
ccttattttaaaagaatatataatatgtga
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