Ligilactobacillus ruminis: LRC_18900
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Entry
LRC_18900 CDS
T01626
Name
(GenBank) Transcriptional regulator
Organism
lrm
Ligilactobacillus ruminis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
EIIA-man
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_2
AAA_14
RuvB_N
AAA_16
TrmB
T2SSE
AAA_22
AAA_7
NACHT
IstB_IS21
FaeA
ResIII
DEAD
AAA_29
AAA_24
nSTAND3
HTH_Crp_2
RNA_helicase
FtsK_SpoIIIE
DNTTIP1_dimer
HTH_20
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEN79113
UniProt:
G2SMS7
LinkDB
All DBs
Position
complement(1954422..1957256)
Genome browser
AA seq
944 aa
AA seq
DB search
MTRKDKIFEYVKQNASIESEGYTTTEISEALGIIRNNVSKELNVLVREGKLQKIDGRPVR
YLLAEREMQSRNKVGEYSQRKSQITGFTNARLTESSNDDYEKDIPQDVFENFIGKNDSLK
NQVEQAKAAILYPPQGLNVLITGPTGSGKTYFANAMYRFAMNTGVIKKQKFTTFNCADYA
HNPQLLMSHLFGYAKGAFTGATEDHDGLIQEADGGMLFLDEVHRLPPEGQEMIFYFMDHG
TYNRLGETAKTHHADVRLVCATTEDPESSLLQTFVRRIPIMIKMPSFSQRSAREQLQLLR
QLLGIEANRTDKDIKLSEDVVKALLGSVTFGNVGQLKSNIQLVCAQAFLNSMQDENEMEI
EFDSLPQNIKDGIPRLANNRTELSKLSRLLEPMMVVHPNDASKIQSESDSYELPYNLYEI
IGSKASLLKEEGLDQPAINNFILTDINLHLKSFYREAKVNQKETNLNEVVDQSTIDLTKK
IKERLQNDYAYNTGDNFIYAMSLHISSFIKRIRSGKPMRTVSGDIVTMVKDYPEDLRLAE
QVKKMIEQYYKFIVPESEVYYLAVLLVSLNSVPKSGSVGVVVAAHGNSTAASMVQVVNKL
LGAENLASLDMSLEMSPKIALKGIIEKVKEVDQGNGVLLLVDMGSLSTFSEQITNETDIP
VKTIDMVTTAMVLEAARKTSLIDSDLKTVYSELRDFNGYYSHKDEEHSSIQNDVDKRRAI
IAICSTGEGTARKIKQIIDNILVDQLIDDVVVVPISVVGMDGRIEELEQNYRIIAATGVV
NPDIGVPFISLDELFKGGGSEFIQLLEDSDRYYELNPGQPAEESLSMSEQTACQYLEQCY
TFINPKKIIGILQNYCDLIERDSKKELGQSKRMGLIMHLAGAIERALLQTPISATESELI
EIRTNKMFSSVQKANQMLEERLNVKFADSETYYIIKLIDTENQD
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaaggacaagatttttgagtatgttaaacaaaacgcaagcatcgagtcggaa
ggatatacgacgaccgagatttcagaagctctcggaatcatcagaaacaacgtcagcaaa
gaattgaacgtcttggttcgtgaaggaaagcttcaaaaaatcgacggcagacccgtcagg
tatttattggccgaacgtgaaatgcagagcagaaacaaagttggcgaatattcgcagcgc
aagtcgcaaataaccggattcaccaatgcaagactgactgaatcaagcaatgacgattat
gaaaaagatattccgcaagatgtttttgaaaatttcatcggtaagaatgacagtttaaaa
aatcaggtagaacaggccaaagctgctattttatatccgccgcaagggctgaacgtttta
attaccggtccgaccggttctggcaaaacctattttgccaatgcgatgtatcggtttgcg
atgaatacgggagtcatcaaaaaacagaagttcacgacgttcaattgtgccgattatgcg
cataacccgcagcttttgatgtcgcatctttttgggtatgccaagggggcatttacgggt
gcgacggaagatcatgacggactgattcaggaagcagacggcgggatgctttttttggat
gaggttcatcgattgccgcctgaaggtcaggaaatgatcttttattttatggatcacggg
acatataatcgtctcggtgaaactgccaagacacatcatgctgatgtgcgccttgtctgc
gcaacgacggaagacccggaaagttctttgcttcagacgtttgtcagaagaataccgatc
atgatcaagatgccaagtttctctcaaagaagcgcaagagaacagctgcagcttttacgg
cagctgttggggattgaagccaatcgaaccgacaaggacatcaaattgagcgaggacgtc
gtcaaagctcttcttggaagcgttacgttcggcaacgtcggacagcttaaatcaaatatt
cagcttgtttgcgcacaagcatttttgaacagcatgcaggatgaaaatgaaatggaaatc
gagtttgactcgcttcctcaaaacatcaaggacggaattccgcgacttgccaacaacaga
acggaattaagcaaactgtcgcgtttgttggaaccgatgatggtcgttcatccaaatgac
gcttcgaagattcaatcggaaagcgacagttatgaattgccttacaacttgtatgaaatc
atcggttccaaggcttccctgctgaaagaagaagggttggatcaacctgcaatcaacaac
tttattttgacggacatcaacctgcatttgaaatcattttatcgtgaagcaaaggttaat
caaaaagaaacgaacttaaacgaagttgttgatcaaagcacgatcgatctgaccaaaaaa
atcaaggaacgccttcaaaacgattatgcctataatacgggagacaacttcatctatgcg
atgagcttgcacatcagctcgtttatcaagcggattcgctcaggcaagccgatgcggact
gtttccggagatatcgtgacgatggtcaaggactatcctgaagatttgcggctcgccgaa
caggtcaaaaagatgatcgaacagtattacaagttcatcgtaccagagtcggaagtttac
taccttgccgtgttgctcgtttcgctgaattccgttccgaaaagcggcagcgtcggggtc
gtggttgcggcgcatgggaacagtactgccgcttcaatggtccaagtggtaaacaaattg
cttggggcagaaaacctggcttcccttgacatgtcgcttgaaatgagtccaaagattgcg
ttgaagggaattattgaaaaagttaaggaagttgatcagggcaacggcgtgttgttgttg
gttgatatgggatcgctcagtaccttcagcgagcagattacgaatgagacggacattccc
gttaaaacgatcgacatggtaacgacggcgatggttttagaggcggctcgcaaaacttca
ttgatagacagtgatttgaagactgtttattcggaattgcgagattttaacgggtattat
tctcataaggacgaagaacattcttcaattcaaaatgatgttgataagcggcgcgcaatc
atcgcaatctgttcgaccggtgaaggaactgcccgaaaaatcaagcagataatcgataat
attttagttgaccaattgattgatgacgttgtcgtcgttccgatctctgttgtcggaatg
gatggtcgaattgaggagctcgaacaaaattatcgcataattgccgcaacgggagtcgtc
aatcctgacattggcgttccgttcatttccctggatgaattgtttaaagggggcggcagc
gagtttatccaactgttggaagattctgatcgatactatgaattaaaccccgggcaaccg
gctgaagaatcgctgtcgatgagcgagcagacggcctgccagtatttggagcaatgctat
acgttcatcaatcccaagaagattatcggcattttgcagaattattgtgatttgatcgaa
cgagattcgaaaaaagaattgggacagtcgaaacgaatggggctgatcatgcatttggca
ggagcaatcgagcgcgcgttgctgcaaacaccgatttctgcaactgaatcggaattgatc
gaaataagaaccaacaaaatgttttcgagcgtgcaaaaagccaatcagatgctggaagag
cggcttaacgtcaagtttgccgattcggaaacgtattacatcatcaaactgattgataca
gaaaatcaagactaa
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