Ligilactobacillus ruminis: LRC_19220
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Entry
LRC_19220 CDS
T01626
Name
(GenBank) ABC transporter ATP-binding and permease protein
KO
K18892
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRC_19220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrm02000
]
LRC_19220
Transporters [BR:
lrm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LRC_19220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
AAA_21
AAA_24
Zeta_toxin
AAA_30
T2SSE
AAA
AAA_7
AAA_25
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEN79143
UniProt:
G2SMV7
LinkDB
All DBs
Position
complement(1998585..2000345)
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AA seq
586 aa
AA seq
DB search
MKNLKQSIGYFVKYMKPFKNSVLIMVFLLLIAMIAQIVAPYYMGQAVTSLGRFLAHKAHA
MADFRHFMLLMCAAFFFQVFAQLIAWVIMSVFNAEATNSMRISLFKKLQKMTIRYFDTHQ
DGKLLALFNSDIDNIFNALNGAIFDLVSQTILFVGTIVVMFAINVKLALVTMASTPIVVL
IAFSVMKKARKYLDEQQEDISVLNGYINEQLNGERIILANGLQKSSIAGFVKRNDKLRKT
MFRGQFYSGLMFPMMYGLSMLNLAIVISVGTLIVVESGMSLAVGMGLIVTFVQYSQTYFI
PLINLTSFYSMIQLALTGARRLSDVEAEKEEDEVSSGINMQGINESVALKDVHFSYEKGK
EILHGINLTIPRGKTLALVGPTGSGKTTTMNLFSRFYDVDSGTVEFDGTDVRKFSLDSVR
NHVGIVLQDSILFTGTIADNIRFGKPDATMEEVKSAAQKAQIADFIESLPDGYETKISDE
QSLFSKGQKQLMSIARTLLSDPEFLVLDEATSNVDTVTEEKIQKAMDIVMEGRTSFVIAH
RLKTIVNADEIAVLKDGSVIEQGSHEELLAKGGFYHNLYVNQMVLD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttaaaacaaagcatcgggtatttcgtcaagtacatgaaaccttttaaaaat
tcagtgctcatcatggtctttttgcttttgatcgcaatgatcgcacagatcgttgcacct
tattacatgggacaggccgtgacttcgctcgggagatttttggcgcacaaggcgcatgcg
atggcagattttcgtcatttcatgcttttgatgtgtgcggcatttttcttccaggttttt
gcgcagcttatcgcctgggtcatcatgtccgtttttaacgctgaagcaacgaattcgatg
agaatcagtctgttcaaaaagctgcagaagatgacgatcaggtattttgatactcatcag
gacggaaagttgctggcattgttcaattcggatatcgacaacatcttcaatgcgctgaac
ggtgcgatttttgatcttgtttctcaaacgattttgtttgtcgggacgatcgtcgtcatg
tttgcaatcaacgtcaaactggcgctcgtgacgatggcttcaacgccgatcgttgttttg
atcgcattcagcgtgatgaagaaagcgcgaaagtatcttgacgagcagcaagaagacatc
tccgttttgaacggctacatcaacgagcagctgaacggagaacgcattattttggccaac
ggtcttcaaaaatcatcgattgcagggtttgtcaaaaggaacgacaagcttcgaaagacc
atgtttcgcggtcaattctattctggactgatgtttccgatgatgtatggtctgtcgatg
ctgaatttggcaatcgtcatctcagtcggaaccttgatcgtggtcgaaagcggcatgtcg
cttgccgtcggaatgggtttgatcgtcacgttcgttcaatactctcaaacatatttcatt
ccgctgatcaacctgacttcgttttactcaatgattcagcttgctttgacgggggccagg
cgtctgtccgacgttgaagccgaaaaagaagaagacgaagtttcttccggcatcaacatg
cagggaataaacgaaagcgtggctttgaaagacgttcatttcagttatgaaaaaggaaaa
gaaatccttcacggcatcaatttaacgattcctcgcggcaagacgctggctttggtcggc
ccgaccggatccggcaaaacgacgacgatgaatctgttcagtcgtttttatgacgtcgac
agcggcacggtcgaatttgacggaaccgacgtgcgaaagttctcgcttgattccgtcaga
aaccatgtcggaatcgtgctgcaagattcgattctgtttacgggaacgattgccgacaat
attcggtttggcaagcccgatgcaaccatggaagaagtcaaatctgctgctcaaaaagca
cagattgccgattttatcgaaagtttgccggacggttacgaaactaagatcagcgatgag
cagtccttgttttcaaaagggcaaaagcaattgatgagcatcgctcgaacgttgctgagc
gatcccgaatttcttgttttggatgaagccacgtcaaacgttgacaccgtgacggaagaa
aagatccaaaaagccatggacatcgtgatggaaggtcgtacaagcttcgtgattgcgcac
cgcttaaagactatcgtcaatgccgatgaaatcgccgttttaaaggacggcagcgtcatt
gagcagggaagccacgaagaactgcttgcaaagggcgggttctaccataatctgtatgta
aatcagatggtgttggattaa
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