Ligilactobacillus ruminis: LRC_19230
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Entry
LRC_19230 CDS
T01626
Name
(GenBank) ABC superfamily ATP binding cassette transporter, membrane protein
KO
K18891
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lrm
Ligilactobacillus ruminis
Pathway
lrm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRC_19230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrm02000
]
LRC_19230
Transporters [BR:
lrm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LRC_19230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
DUF87
AAA_29
AAA_16
MMR_HSR1
G-alpha
AAA_18
MeaB
NB-ARC
RsgA_GTPase
AAA_22
CysG_dimeriser
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AEN79144
UniProt:
G2SMV8
LinkDB
All DBs
Position
complement(2000345..2002069)
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AA seq
574 aa
AA seq
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MMRNLMSHVRNYRIPVWGSVISLIIAAFCSLLQPWLLQDTLNCLMKNDAAGIKEYGIFLL
LLAAIGVVCGILNIWFAAKTAQGVTSDVREQLYRKIQSFSFSNIEKFSVGTLIVRLINDM
NQVTNIIMTTLMQVLRMPIILIGSFVMGIVTLPRYWWVQILLLLIVSLVLFFVFPSLDKL
FSKYQVWFDECNTVARESMQGVRVVKSFNQQDQETEKFTASSNELNRLNIKIGYVFSILM
PAFTLVVCIGTALIVYLVGKNIELYPKDISAISSYVGYLNQMLSSLAFGGMMLAQYSRGL
VSLKRIDEVIETEPDLKFNHEESNVDLKGSVEFDDVSFKYPGSSKEALSHVSFKVNSGET
VGIVGRTGSGKSTLVSLLVRLYDPTSGTIRLGGCDLRDVNERKLRKMAALVQQKTLLFSG
TIADNLRQGDENATEEDMERAIEISQAKEFIDKYPDRFEHVVEERSANFSGGQQQRLSIA
RGIIGKPKVLILDDSTSALDAESERKVQAGLEQKLGDATVFIIAEKIFSVMHADKILVMD
DGKIKAMGTHEELLLTSPLYQEIYETQRAREGGI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgaaatttaatgtcacacgtcagaaattatcgcattccggtttggggttcggta
atttctttgatcattgcggcgttttgttcgctgcttcagccttggctgctgcaggatact
ttaaactgtttgatgaaaaacgatgctgcaggaattaaagaatacggcatctttttgttg
cttctggcagccatcggcgtcgtgtgcggaattttgaacatttggtttgcggccaaaacg
gcccaaggcgttacgagcgacgtccgcgaacagctttatcggaaaatacagagcttttca
ttttcaaacatcgaaaaattttcggtcggaacgctgatcgttcgtttgatcaacgacatg
aatcaggtaacgaacatcatcatgacgactttgatgcaggtcttgaggatgccgattatt
ttgattggttcatttgtcatgggaatcgtgacgctgccacgttactggtgggttcagata
ttgttgcttctgatcgtttcattggtgctttttttcgttttcccgtcgcttgacaagctg
ttttctaaatatcaagtctggtttgacgaatgcaacacggtcgcaagagaatcgatgcag
ggtgtcagagtcgtcaaatcgttcaaccagcaagatcaggaaactgaaaaattcactgct
tcgtcaaacgaactcaatcggcttaacattaaaatcggctacgttttttcgattctgatg
ccggctttcacgctcgtcgtctgtattggaacggccttaatcgtttatctggtcggcaaa
aacatcgagttgtatccaaaagacatcagcgccatcagttcttatgtcggctaccttaac
caaatgttgtcaagcctggcgtttggcgggatgatgcttgcgcagtactcacgtggcctc
gtttctttgaaacgaattgatgaagtaattgaaacggagcctgatttaaagttcaatcat
gaagaatcaaacgttgatctgaaaggttccgttgaatttgacgacgtcagcttcaagtat
ccgggaagcagcaaagaagctttgagccacgtcagctttaaagtcaattccggagaaacg
gtcggaatcgtcggcaggaccggttccggtaaatcaacattggtctctttactggtcaga
ttgtatgatccgacgtccggaacgatccgtcttggcggatgcgatcttagagacgtcaat
gaacggaaattgcgaaaaatggcagcattggttcagcaaaaaactttgctgttcagcgga
acgattgccgataatctgagacagggcgatgagaatgccacggaagaagacatggaacga
gcaatcgaaatttcccaggcaaaagaatttatcgacaaatatccggatcggttcgaacac
gttgttgaagagcgttcagccaatttttccggcgggcagcagcagcgtctgtcgattgcg
cgaggcataatcggcaagccgaaagttctgattttggatgattcgacttcagcgcttgat
gcggagtccgaaaggaaagttcaagctggtcttgaacaaaagctgggtgacgccactgta
tttatcattgccgaaaaaatattttcggtcatgcatgccgataagattctcgtgatggac
gacgggaagatcaaggcgatgggcacgcatgaagagctgcttttgacatcgccgctttat
caagaaatttatgaaacgcaaagggctagagagggtggaatttga
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