Ligilactobacillus ruminis: LRC_19570
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Entry
LRC_19570 CDS
T01626
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lrm
Ligilactobacillus ruminis
Brite
KEGG Orthology (KO) [BR:
lrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrm03016
]
LRC_19570 (trmE)
Transfer RNA biogenesis [BR:
lrm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LRC_19570 (trmE)
Prokaryotic type
Methyltransferases
LRC_19570 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
Ras
AAA_22
Csa3_N
Roc
TniB
ABC_tran
Sir1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AEN79172
UniProt:
G2SMY6
LinkDB
All DBs
Position
complement(2033718..2035106)
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AA seq
462 aa
AA seq
DB search
MATVTEFDTIAAISTPPGEGAISIVRMSGEEAVSIAQKVFSGKDLTQAKSHTINYGHIVD
PKTHEEIDEVMVSLMLAPKTFTREDVVEINCHGGIVATNRILQLLLVNGARLAEPGEFTK
RAFLHGRIDLTQAESVMDLIRAKTDRSMKIALNQLDGNLSHLIDSLRKDILDVLAQVEVN
IDYPEYDDVEEMTTKLLKEKAIEIKQRIEQLLKTASQGKIMREGLATALVGRPNVGKSSL
LNHLLHEDKAIVTDVAGTTRDVIEEYVNVSGVPLKLIDTAGIRETDDKVEKIGVERSKKA
IEQSDLVLLVLNAAESLTKEDFELIRLTNDKKRIIILNKTDLEEKLDRKELAKISGNAPV
YATSILKNEGVEALEEAISKLFFNGIENSQSTVMVTNARHIALLKKAQNSLDSVLEGISS
GMPVDLVQIDMTEAWNLLGEITGESYEDELLDQLFSQFCLGK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctacggtgacggaatttgatacaattgcagcaatctcgacccctccaggcgaaggg
gcaatttcgatcgtgcgaatgagcggtgaagaagccgtttcaattgcgcaaaaagtcttt
tcgggcaaggacttgacgcaggcgaaaagtcatacgataaactatgggcatattgtcgat
ccgaaaacccatgaggaaattgacgaagtgatggtttctttgatgcttgcgccaaagact
tttaccagagaagacgtcgttgaaatcaattgccatggcggcatcgttgcgacgaatcgg
atcttgcagctgcttttggtaaacggagccagactggccgagccgggcgaatttacgaag
cgcgcgtttcttcatggaagaatcgacctcacccaggctgaatcggtgatggatctgatc
agggccaaaacggatcgttcaatgaaaatcgctctgaaccagcttgacggcaacttgtct
cacctgatcgattctttgagaaaagacattttggacgttttggcacaagtcgaggtcaac
atcgattatccggaatatgacgacgttgaagagatgacgacgaagctgctcaaggaaaag
gcaattgaaatcaagcagcgcatcgaacagctgctcaagactgcttcgcaaggaaaaatc
atgcgcgaagggttggcaacggcgcttgtcggacgtccgaacgtcggcaaatcaagtctt
ttgaaccatcttttgcatgaagacaaggctatcgtgactgacgttgcgggcacgacgcgc
gacgtgatcgaagaatatgtcaacgtgtcaggcgttccgttgaagctgatcgatacggcc
ggcatcagagaaacggacgacaaggttgaaaaaatcggggtcgaacgttcgaagaaagcc
atcgagcagtccgatttggttttgctggtgttaaatgcagcggaaagtctgacaaaagaa
gattttgaactgatcagactgaccaatgacaaaaagcgaataatcattttgaacaaaact
gaccttgaagaaaagctcgatcgcaaagaactggcaaaaatttcgggaaatgcaccggtt
tacgcaacgtcgatcttgaaaaatgagggtgtggaggccttggaagaggcaatttccaag
ctgtttttcaacggaatcgaaaattctcagtcaacggtaatggtaacgaacgctcgacat
atcgcactgcttaagaaagcacaaaattcgcttgattctgttcttgaaggaatcagttca
gggatgccggtcgatctggtgcagatcgacatgacggaagcctggaatcttttgggcgaa
attaccggtgaaagctacgaagacgagctgttggatcaattattcagtcaattctgtttg
ggaaagtag
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