Lacticaseibacillus rhamnosus LOCK900: LOCK900_0615
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Entry
LOCK900_0615 CDS
T02730
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_0615
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOCK900_0615
Archaeal homologous recombinant proteins
LOCK900_0615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_15
AAA_21
ABC_tran
DUF5906
nSTAND3
AAA_18
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGP70469
LinkDB
All DBs
Position
614727..617858
Genome browser
AA seq
1043 aa
AA seq
DB search
MKLKQLHMQFFGPYADETVNFEDFRTSPLFLISGPTGSGKTTIFDALVYALYGETSGERD
GMQMRSNFASHHDLTKITLTFDHDGKHYRVVRQPQQIQQKKRGDGLTEVKAKALLAIADA
DKQVAEYTKKNQVQSQLDAILHLDAKQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMQAQTKQQGAAIQDQERMLNLLTSQFEFATPPSDNATMADKLALMRQDVTH
QATTVTNLQTMAGQRHQRYQTAQTALQTGKQLAQAFEDRKQTAAALAQLAEQKQTQEDRL
KLMERLTWVQEHEAAEQRVQKAARDLTLAKTQLVQTQTAIKTTQQAMNQAQTKLNDLQQQ
DSAIEAKKTQLDQLQSVKQQLVAIADQEKQVAQQTAAVAQAEAASVQAQKKLANDQKKLD
QYQTELNQLAVSDLADRAADHKQLVAALKPVAANYQDAHAEAKQLASKLTDTKALLIQAT
NVSQSAEQQLNQLQQTQIRQQIAQLAAKLTPGTPCPVCGSVEHPHPAVALDEPLVTEAEV
KQATQARQQAAAKETTLQAQVSNLEEQHAAATKKANVAKNSFWAQVSSSIDAVSPQSEQS
DVLKQLAILEEKAQTAVQALSAAQIRQDALRKAITVGQTVVSADDQEIQATQSALNTAKI
EAAKANSALTTMKASLPAGTTDLKTVTEQSHVLTEAIKTYQEQLKTAQRQLSEFDRQLAG
LHADERHATDQIATLKKEHQEAEDDFLSAVTDYFGSDGVTKFAAMREQLGQLPLLQQQTQ
RYKDDVLKQQTLLAAANKTIGDQPQPALDQLEAQASAAEAEATKAQTAFIEAKQKHDTAQ
RLLEQAADILAANQTALAAYADLQTLTAVMNGNGPKKLSLERYVLQAYLQEVLDVANTRL
QVLSNQRYQFVLHTDLGTQKIHSGLEIDVYDDQVGERRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDTNSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVQPAGTGRSRIKVMHMASA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttaaacaattacacatgcagtttttcggaccctatgcagatgaaacggttaat
tttgaagattttcgcacgagcccgctattcttaatcagcggaccgactggcagcgggaaa
accacgatttttgatgccttagtgtatgcgttatacggcgagacgtcaggggaacgcgat
ggcatgcagatgcggtccaactttgccagccaccatgatctgactaaaattacgttaact
tttgatcatgacggtaaacattatcgggtagtgcggcaaccgcaacagatacagcaaaaa
aaacgtggcgatggactgactgaggtcaaagcaaaggccttattggcgattgcagatgct
gataagcaagtggccgaatataccaaaaaaaatcaggtccaaagccagcttgatgcaatt
ttacatcttgatgctaaacaatttcggcaaattgttttactgcctcaaggagactttcgg
cgttttctagatgccgacagtaatgccaaagaagatttacttcgggatttatttgggacc
cagttgattcaacgctggcaaacagccatgcaggcgcaaaccaagcagcagggagccgcg
attcaggatcaggaacggatgctgaatttgctaacgtcacagtttgaatttgccacgccg
ccatctgacaacgcgacgatggctgacaaattagccttgatgcgtcaggatgtaacgcac
caagcaacaaccgtcaccaacctgcaaaccatggcaggccaacgccaccagcgctatcag
acggcccagacagctcttcagaccggtaagcagctggcacaagcatttgaagaccgaaaa
caaactgctgcggctttggcacaacttgctgaacaaaagcaaacgcaggaagaccgcctc
aagttaatggagcggttaacctgggttcaagaacacgaggcagctgagcaacgggtacaa
aaagcagctcgcgatttaactctagccaagacgcaattagtacaaacccaaacggcaata
aaaaccactcagcaggccatgaaccaggcccaaacgaaattaaatgatttacagcagcag
gattcagctattgaagccaaaaagacgcaacttgatcaactgcaatcggtcaaacagcag
ctcgttgcaattgcggatcaagagaaacaagtagcccaacaaaccgccgcagttgcacag
gcagaagcagcgtctgtacaggcgcaaaaaaaattggcaaatgatcagaaaaaacttgat
caatatcaaaccgagttaaaccaactagcagtgtcagatttggcagatcgagcagctgac
cataaacaattagtggcagcactgaaaccggtagccgctaattatcaagacgcacatgct
gaagctaaacaacttgccagcaagctaacggacacaaaggcgttgctgattcaggcgaca
aatgtgagtcaatctgccgagcagcagttgaatcaattgcaacagacccagatccggcaa
caaattgcccaattggcggctaagttgacgcccgggaccccttgcccggtttgtggcagt
gtcgagcatccacacccggctgtagccttggatgaaccgctggtgactgaggctgaggtg
aaacaggctacccaagcacgccagcaagcagcggcaaaagaaacgactttgcaagcccaa
gtatccaacctagaagaacagcacgctgccgctaccaaaaaggcaaatgtagcaaagaac
agtttttgggcgcaggtgagctcaagcatagatgcagtgagtccccaaagcgaacagtcc
gatgttttgaaacagctggcaatacttgaagaaaaagcacagactgcagttcaagcgtta
tccgcggctcagatcaggcaggatgcgttgagaaaagcaataacagttggtcaaactgtt
gtgagcgcagatgatcaggaaattcaagcaacccaaagtgcgcttaatacagcgaagatt
gaggcggcaaaagctaacagtgcactgacgaccatgaaagcaagcttacctgcaggtacg
actgatcttaagacagtaaccgaacagtcgcatgtcttgactgaagcaatcaagacttac
caggaacaattaaaaacggcgcagcgtcagttaagtgagttcgatcgccagttagcaggc
ttacatgcagatgaacgccatgctactgaccagatcgcgacactgaaaaaagagcaccag
gaagcagaagatgactttttatctgcagtaactgattattttggttcggatggtgtcaca
aaatttgctgccatgcgcgagcaattagggcaattaccacttttgcagcaacaaacgcag
cgttataaggatgacgttttaaagcagcagacattactggcagccgctaacaagacgatt
ggcgatcaacctcaacctgcccttgatcagcttgaggctcaagcaagtgcagctgaagca
gaggcaacaaaagcacaaactgccttcattgaggcaaagcagaaacatgatacagcccaa
agattgctcgaacaggccgcagatattttagcggccaatcagactgctttggctgcctat
gccgacttgcagacactgaccgccgttatgaacggcaatggccccaaaaagcttagtttg
gaacgttacgttttacaagcctatcttcaggaagttttggatgttgccaacacccgcttg
caagtgctttccaatcagcgctaccaatttgtgttgcacacggatttgggaactcaaaag
atccattcgggtttggaaatcgatgtttacgatgatcaggtgggtgaacgccgcgcagtt
caaacactatctggcggtgaaagctttattgctgcgttgagccttgcattggcactgggc
gaggtgattcagcaagaaagtggcggcatcaatatcgatgctttgtttgttgatgaaggc
ttcgggagtttggataccaatagccttgatgtggcaatgaacgcgcttgaatcgctagaa
ggcgagtcgcgattgatcgggattatttcgcacgtgacggaattaagggataatattcct
gatcagttgcaggtgcaaccagcagggacaggacggagtcggattaaggtgatgcatatg
gcgtcggcgtga
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integrated database retrieval system
