Lacticaseibacillus rhamnosus LOCK900: LOCK900_0987
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Entry
LOCK900_0987 CDS
T02730
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro03420
Nucleotide excision repair
lro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LOCK900_0987
03430 Mismatch repair
LOCK900_0987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_0987
Enzymes [BR:
lro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOCK900_0987
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOCK900_0987
MMR (mismatch excision repair)
Other MMR factors
LOCK900_0987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Terminase_6N
ResIII
DUF3045
Motif
Other DBs
NCBI-ProteinID:
AGP70801
LinkDB
All DBs
Position
956635..958887
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AA seq
750 aa
AA seq
DB search
MVMDAALKGMNDKQAEAVLATEGPVLIMAGAGSGKTRVLTHRIAYLVEEKNVNPWNILAI
TFTNKAAREMRERVGKLVDPEIARDIWVSTFHALCVRILRRDIDKLGYNRAFTIADPAEQ
LTLVKHILADFNLDPKRYDPKAILGAISGAKNELIDPQTYSDEQANSPFTKTVAQVYAEY
QKRLRSDQALDFDDLIMQTIVLFEKDPETLGFYQRKFRYIHVDEYQDTNEAQYRLVHMLA
EGYHNLCVVGDADQSIYGWRGANMQNILDFKKDYPKAQVILLEQNYRSTKTILSAANDVI
KNNLNRQAKTLWTENATGDKITYYRAQSETDEAIFVIRRIEAEMAQNHRKYGDFAILYRT
NAQSRAIEEAFVKSNIPYKMVGGHKFYDRKEIRDALAYFRLVVNPDDDMSFNRIVNEPKR
GIGNTSVAKLEAFANQHDWSLLEAAANAELSPISGKARGNLAQFGKMIQRLGQRRKDLNV
TEMMQAILDDSGYLGTLRAANTLEAETRVENLEELLSVTQGFDARYQPENEDSDIFVDFL
AELALLSDQDEVEEDAQEVTLMTLHAAKGLEFPVVFLVGMEEGLFPLSRAAMDEGELEEE
RRLAYVGITRAKQKLYLTNAYARMLYGQRQNNPASRFIEEIDPELLDISGAAQPKSDIPF
INRTDRAFSSPYSRHPETTGTPVTVKPAPTTGAGKTSWEAGDKVEHRKWGIGTVVKVTGT
GDDQELDIAFKAMGIKRLLAAFAPIKKVEA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtaatggatgccgcattaaagggtatgaatgataagcaggcagaggcggtgttagcc
actgaaggaccggttttgattatggcaggagccggttctggtaagacgcgggtattgacc
caccgaattgcttatttagttgaagaaaaaaacgttaatccatggaacattcttgccatt
acgtttacgaacaaagctgcgcgggaaatgcgggaacgggtaggtaaactggtcgatcct
gaaattgcccgcgatatttgggtttcaacgttccacgcattgtgtgttcggattttgcgg
cgcgacattgacaaactcggttacaatcgggcgttcacgatcgctgacccggccgaacaa
cttactttggttaagcacattttggccgacttcaatctggatcccaagcgttatgatcct
aaggcgattcttggcgcgatttcgggtgccaaaaacgaactaatcgacccgcaaacttat
tcagacgagcaggccaacagcccatttaccaaaactgtggcccaagtttacgcggaatat
caaaaacgcctgcgcagtgatcaggcactggactttgatgatctcatcatgcagaccatt
gtgttatttgaaaaggatcccgaaacgctcggcttttaccagcgcaaattccggtatatt
cacgttgatgagtatcaggatacgaacgaagcccaatatcgcctcgtgcatatgctggcg
gaaggttatcacaatctgtgcgtggtcggggatgccgatcagagtatttacggttggcgt
ggcgctaatatgcaaaacattctggactttaaaaaggactaccctaaagcccaagtcatt
ttgcttgagcagaattatcgctcaaccaagacaatcctgagtgctgccaatgatgtgatt
aaaaataatctgaatcgccaggccaaaacgttatggaccgaaaatgccaccggcgacaag
atcacgtattatcgggctcaaagcgaaaccgatgaagccatttttgtgattcggcgcatt
gaagcggaaatggcacaaaatcaccgcaagtatggggactttgcaatcctgtaccggaca
aacgcccaatcccgtgcgattgaagaggcgttcgtgaagtccaacattccttataagatg
gtgggcggacataaattctatgatcgtaaggaaattcgcgatgccttggcttatttccgg
ttggtcgtcaacccggatgatgatatgagctttaatcggatcgtgaatgaacctaagcgc
gggattggcaatacaagtgttgctaaactggaagcctttgctaatcagcatgattggtca
ctcttggaagcagcggcaaatgctgagcttagtccgatttcaggcaaagcccgcggcaat
ctagcccaattcggtaaaatgattcaacgacttggtcagcggcggaaagatttgaacgtt
acggaaatgatgcaggcaattctggatgatagcggttatttagggacgttacgtgccgcc
aacaccttggaagccgaaacgcgagtggaaaaccttgaagaacttttgtcagtgacccaa
ggatttgatgcgcgctaccagccagaaaatgaagacagtgatatttttgtcgacttttta
gctgaattggcgctgttgtctgatcaagatgaagttgaagaagatgcccaggaagtgacg
ttgatgacgttgcatgcggctaagggactggaatttccagtggtctttctggtgggcatg
gaagaagggcttttcccgttgagtcgcgcggccatggatgaaggcgagcttgaagaagag
cggcgattggcttacgtcgggatcacccgagcaaaacaaaagttatatttgaccaatgcc
tatgcccggatgttgtatggccagcgtcaaaataatccggcgagccgttttattgaagaa
attgatcctgaattgcttgatatttccggtgctgcccagccgaaaagtgatataccgttc
atcaaccgcaccgatcgcgcctttagttcgccctatagccgtcatcctgaaaccaccggg
acgccggtaaccgttaaaccggctccaaccactggtgccggtaagacaagctgggaagcc
ggcgataaagtcgaacaccgtaaatggggaatcggtaccgtggtcaaagtaaccggcacc
ggtgacgatcaggaactagatatagcctttaaagcgatggggattaaacggttactggct
gcgtttgctccgattaaaaaagttgaagcctaa
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