Lacticaseibacillus rhamnosus LOCK900: LOCK900_1217
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Entry
LOCK900_1217 CDS
T02730
Name
(GenBank) Transcription accessory protein (S1 RNA-binding domain)
KO
K06959
protein Tex
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LOCK900_1217
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
Motif
Other DBs
NCBI-ProteinID:
AGP71027
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Position
1159058..1161235
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AA seq
725 aa
AA seq
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MIEDRTIQIVQQDLTGMTSRQISTVLNLMNEGNTVPFIARYRKEMTGSLDEVQIQAIEEA
YKRVTALQDRKAAVIKSIAEQGALTPELEQQIHASTKLQDVEDIYLPYKQKRQTKATIAK
ARGLEPFAQWILSFPVGDLTSEAAKFVNPDKEVATEQDVLDGAHEILAEKFSEMAPIRNW
VRNFTMRTGTIKTTVKTKGKELDEKGVYQQFYDFEETVKKMSSTRTLAINRGEKEKILTV
KVQVDPASVMQYCHFKLIDNRPSTEATAFIEAAYQDAYKRFIGPAIEREVRNTLTESAEE
QSIKVFGQNLYNLLMQAPIKGKVVLGFDPAYRTGCKLAVVDENGKFLDKAVIYPHKPAPE
KKRQAAASELIALLEKYHVTMIAIGNGTASRESEQFVAETLKQIKRDIYYVIVNEAGASV
YSASQEARDEFPDLHVEQRSAISIARRLQDPLAELVKIDPESIGVGQYQHDLPAKALASE
VDAVVERAVNQVGVNLNTASYQLLTHISGLSKTIATNIVKYRDENGRYNSRAELKKVPRL
GPKSFEQSVGFLRIIGGKQPLDNTDIHPESYPVAKKILAAAGLSTADLGDHEVIAKVASV
DVAPFVNDGVGVETVHDIISSLQNPGRDLRDNMAAPLLRQDVLTMEDLKPGMKLEGTVRN
VVDFGAFVDIGVKHDGLVHVSKMTRKFVRDPKTVVAVGDIVTVWIESVDLNRERIQLTMI
APTVG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaagaccgaaccattcaaatcgtacaacaagacttgacgggaatgacgagccgg
caaatcagtacggttttgaatttgatgaatgaaggcaatacggttccgtttattgcgcgg
tatcgtaaagaaatgaccgggagtctggatgaagttcagattcaggcgattgaggaagcc
tataaacgggtgacggcgctgcaggatcgtaaagctgccgtgatcaaaagtattgccgaa
caaggggcgctgacgccagagctggagcagcaaatccatgctagtaccaagttgcaggat
gttgaggatatttatttaccttataagcagaagcgtcaaaccaaggcaaccattgcaaaa
gcgcgcggacttgaaccctttgcgcagtggattctttctttcccagtaggcgatttgacg
tctgaagcggccaaatttgtgaatccggacaaagaggttgcgactgagcaggacgtgttg
gacggtgcccatgaaattcttgcggagaagtttagcgaaatggcaccgatccgtaactgg
gtacgcaatttcaccatgcgtaccggtacgattaaaacgaccgtgaaaaccaaaggcaag
gaactggacgaaaaaggcgtttatcagcaattttacgattttgaagagaccgtcaagaaa
atgtcatcgacccggacactggccattaatcgtggcgaaaaagaaaagattttgacggtt
aaggttcaagttgacccagcttcagtgatgcagtattgccattttaaattgattgataat
cgcccgagtaccgaagcaacagcgtttattgaagcggcgtatcaggatgcctacaaacgc
ttcattggcccggcgattgaacgggaagtacgcaatactttaaccgaaagtgctgaggag
cagtcgattaaggtctttggtcagaatctgtacaacttgctgatgcaggcaccgattaaa
ggcaaggtggttctcggctttgatccggcttaccgcaccggctgcaagctagccgtggtg
gacgaaaatggcaagtttttggacaaagctgtcatttatccgcacaaaccggcgccagag
aagaagcgtcaggccgcggcctcggaactgatcgcgctactcgaaaagtatcatgtgaca
atgattgcgatcggcaacggaacagcaagtcgggaatcggaacaatttgtggcggaaacg
ctcaagcagattaagcgggatatttattatgtcatcgtcaacgaagctggggcatcggta
tattcagccagtcaagaagcgcgggatgagttcccggatttgcatgtcgaacagcgcagc
gcaatcagcattgctcgccgcctgcaggatccactggcggaattagtgaagattgatccg
gaatcgattggtgtgggacagtatcagcacgatttacccgccaaggcgttggcaagtgaa
gtcgatgcagtcgtggaacgggcggtcaatcaggtcggcgttaacctgaacacagctagt
taccaactattaacccacatttccggattatcgaaaacgattgcgactaatattgtgaaa
taccgcgatgaaaatggccgctataatagccgtgccgaattgaaaaaagtgccgcggctg
gggccaaaatcatttgaacagtcagttggttttctgcgaatcattggcggtaagcagcca
cttgataacaccgatattcacccggaaagttaccctgttgccaaaaagattctggctgcg
gcggggttatccacggctgatttaggtgatcatgaagtaattgccaaggttgctagtgtt
gatgtggccccatttgtcaacgatggtgttggcgttgagacagtgcatgacatcattagc
agcctgcaaaaccccggtcgcgatcttcgtgacaacatggctgcaccgcttcttcggcaa
gacgtcctcaccatggaagacctgaagccgggcatgaagctggaaggaactgtccgcaat
gtcgtggatttcggcgcgtttgtcgacattggcgttaagcacgatggtttagtccatgtc
tctaaaatgacccgcaagtttgtccgcgatcctaaaacggttgtggcagtcggtgatatt
gtgaccgtctggattgaatcggtggatcttaaccgcgagcggatacagctgacgatgatc
gcgccgactgtcggttaa
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