Lacticaseibacillus rhamnosus LOCK900: LOCK900_1343
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Entry
LOCK900_1343 CDS
T02730
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro03030
DNA replication
lro03430
Mismatch repair
lro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOCK900_1343
03430 Mismatch repair
LOCK900_1343
03440 Homologous recombination
LOCK900_1343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lro03032
]
LOCK900_1343
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_1343
Enzymes [BR:
lro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOCK900_1343
DNA replication proteins [BR:
lro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LOCK900_1343
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LOCK900_1343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGP71152
LinkDB
All DBs
Position
1289052..1292348
Genome browser
AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALPDLIQAAKNRGYSAVALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIEIADAKLLVIAENNTGYHQLLKLSTQIMLAQQPLAFADLLPLNGLAAVTLPDS
PFGVAVSERHEDQAQTFLTTLKAKQPSSLYIGVDEEHLEGTLPAFADTVKLPLLALGNVL
YRDPTDAFTQKVMVAIETGSQLNFRDPVLTDAGPAWLKPPTDAAKPFVQAGLQAAVTQTE
AIAARADVTIDFKQPQLPHYQTPDQTPSKDYLTKLAESGLAKRFHGQSIPPAYQDRLQYE
LRVIIEMGFADYFLVVWDVMNYAHKVNIMTGAGRGSAAGSLVSYALAITEVDPIEYNLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGKNHMAQIITFGTFGAKQAIRDVARV
FGLSQFESNTWSKAIPNLFHIDLKTAYEQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVTRDTGKPFDPKAIPLDDQATLALFARGDTNGVFQFESSGIKNVLRKLRPTAFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALAKILKPTYGVLVYQEQVMQVANVMGGF
SLGEADLLRRAMSKKKSSVLAAEQDKFIEGALKQGFPEATAKTVYAYIDRFANYGFNRSH
AVAYSKVAFWLAYLKVHYPAAFFAALMNASMNNLPKLRTYVQEAKARKVGLLGPDINQSN
GGFKLSQGKIRFGLLSIKGMRRDFVEAIFAARKNGPFKDLRDLLQRLDPKWLKTDYYKAP
TLAGAFDQFSNNRAQTLANLDELINSVKLAGNDVGLFSMLAPKTIEVPEMPASERLEAEA
EVLGVYLSGHPVDKYAPLKTQYRLINVSDLEEGRAVDILLLVRHIKRIRTKTGKPMAFID
GQDATGNVSLTIFPNLYPTIENLSEDMVVLVNGRVEKRNDDLQLVVNRIQDAQPLLANLP
TAELFIRMDAKDTAMRTDLLKKLQAAHGTTPVITVDTATRESILLDKRYWVKAQTELIDA
LKTQFGANNVVLRKRQET
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcacagcaattataccttattacacagccctttggca
ctgcctgatttgattcaggccgcaaaaaatcggggttattcagccgtggcattaactgac
accaatgttgtttatggcctggtagagttttatcggcaggcaaaagcggcggggttaaag
ccgttattagggatgcaaattgaaattgccgatgccaagttgcttgtgattgccgaaaat
aataccggttatcatcaattgttgaaactctcaacccaaattatgcttgcccaacagccg
cttgcatttgctgatttgctgcccctgaatgggctagcagccgtaacattgcccgattca
ccttttggcgtggcagtttctgagcgtcacgaagatcaggcacagacttttctgacaacg
ttaaaagctaagcaaccaagctccttgtacattggtgtggatgaggaacatcttgaagga
acattgcctgcgtttgcggacaccgtaaagttaccgttacttgctttggggaatgttttg
taccgcgaccccaccgacgcctttacgcaaaaggtgatggtggcgattgaaacaggaagt
caattaaactttcgcgatccggttctaacggatgccgggccagcgtggttaaaaccgcca
accgatgcggccaagccgtttgtgcaagccggcttgcaagcggcggtgacacagactgaa
gcgattgctgcgcgtgccgatgtgacgattgactttaaacagccccagttaccgcactat
cagacgcctgatcaaacgccttcaaaagattatttgaccaagttggctgaatcgggtttg
gccaagcgctttcatgggcagtcgattccgccggcttatcaagatcggttgcagtatgag
ctgcgggtcattattgaaatgggtttcgcggactattttttggttgtctgggacgtgatg
aattatgcgcacaaggtcaacattatgacaggcgccggccgtggttctgcagcaggttct
ctggtgagctatgcattggccattactgaagtcgatccaattgaatataatctgttattt
gaacgatttctcaatcctgcccgagcgcaaatgccggatatcgacttggatattcctgac
aatcggcgcggtgagttgattcagtatgttcacgacaaatatggcaagaatcatatggct
cagatcattacattcgggacttttggggccaagcaggcaattcgcgatgtcgcccgggtt
tttggcttgagtcaatttgaaagcaatacttggagtaaagctattcctaacttatttcac
attgatttgaaaaccgcatacgaacagagccaaccattgaaaaatctggttgccgattcg
ccaaaaaatcggatgctttttcaaacagctttggctttggaagggttgccgcggcattat
tcaacccatgcggctggcattgttttgtcagaagaaccattgactgataccgtcgcgctg
cagcctagtggcgatggactcgaacagactcaggttcccaaagacgatgtggaagcactc
ggattgttgaagatggactttttaggtttaaaaaacctcaacatcttggcagcagcaagt
cattttgtcacccgcgatacaggcaagccgtttgaccccaaggcaattccacttgatgat
caagccacgctggcgttatttgcacgtggtgatacaaatggggtcttccaattcgagtca
tccggcatcaaaaacgttttacgtaaactacgaccaactgcttttgaagatgttgtagcg
gtcaatgccttgtatcgtcccgggccgatggagaacattgataccttcattgcgcgcaaa
aacggtcaggagccaattgcctatccggacccagcgctggccaaaatcctaaagccgact
tatggcgtcttggtttatcaggaacaagtcatgcaggttgccaacgtcatgggtggtttc
agtcttggcgaagcggatttgcttcggcgggcgatgagtaagaagaaatcttccgttcta
gctgcggaacaggataaatttattgaaggtgcccttaagcaaggcttcccggaagcaacc
gcgaaaaccgtgtatgcttacattgatcggtttgctaattacgggttcaatcggtcacac
gcggtggcctatagtaaagtggcgttttggctggcttatctcaaagttcactatcctgcc
gcctttttcgcagcattgatgaacgccagcatgaacaacctgccaaagctacggacgtat
gtacaggaagctaaagcgcgcaaagtggggttacttggtccggacattaatcaaagcaat
ggcggctttaaattgagccaaggaaagatccgctttgggttattgtcaattaagggcatg
cggcgggattttgtcgaagccatttttgccgcccgcaaaaatggaccgttcaaggacctt
cgtgatttattacaacggcttgatcctaagtggttgaaaaccgactactacaaagcacca
acgcttgccggcgcttttgaccaattcagcaataaccgtgcgcagacgctggctaatttg
gatgagctgattaattccgttaagttagccggtaatgatgtcgggttattttcaatgtta
gcgccaaagaccattgaggttcccgagatgcccgcaagcgagcgcctagaggcagaagca
gaagtgcttggggtttatctctccgggcatccggttgataagtatgccccgctaaagacc
cagtatcgccttattaatgttagcgatcttgaagaaggacgagccgttgacatcttgcta
ttagtccggcatatcaagcggattcgaaccaaaaccggtaaacccatggcatttatcgat
ggtcaggatgcgaccggtaacgtgtcattaacaatctttcccaatttgtatccaacgatc
gagaatctttcggaagacatggttgtattagtcaatggccgggtcgagaagcgcaatgat
gatttgcaattggtggtcaatcggattcaggatgcccagccattgttagccaacttaccg
accgcggaattgttcattcgcatggatgccaaggatacggcgatgcgaaccgatttactg
aaaaaactgcaagctgctcacgggacaacccccgtcattacggttgatactgccacccgc
gaaagcattttgctggataaacgttactgggtcaaggcgcagacggaactgatcgatgcg
ttaaagacacagtttggtgcgaacaatgttgtgttaagaaaacggcaggaaacctag
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integrated database retrieval system
