Lacticaseibacillus rhamnosus LOCK900: LOCK900_1470
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Entry
LOCK900_1470 CDS
T02730
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_1470
Enzymes [BR:
lro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOCK900_1470
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LOCK900_1470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGP71278
LinkDB
All DBs
Position
complement(1425474..1429232)
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AA seq
1252 aa
AA seq
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MAKARPSRPRPLTLRLLTAPARAHFSITRSPAQKSACKDLSRNGQNRAITSEAAYTPTSN
RAGSRSLFLGGFHMGLQFILGDATTDHTQTMAAMIHEKLTADSQNRIFLLVPNHIKFEAE
IDLLKRLRQLQQGNSETYVQSRVQVLSFSRLAWFYLKNTPLYQQPRLDQASNTMLVAKIL
AERQADLTIYAGEAQHTGFVTQLADQLSELMIGRITAEDLANTVAALTPGDRHRAKLRDL
GIILDQYEAEIGPYATTASLLSGLQQAMRTHDLTHTFIYLNHFNVFSASESALVETMLET
AAEVTIGLVLDRPYPTAPPVAPNLFLPAGRLYHRLYQKAKTMRAPIRIDQFAQPRHLSLG
MRQVASWWQANTNIEPQPAPPANVADQVHLATATDPYQELRHVAQSIYQAVRNGARYRDF
VILARRLDPYATIIPAIFAEFQIPQFTDLQRPMKDHPLVVLIESLFAIQDHDYQYQDIMR
LLHTELLLPQEMTVADYRDAVDTLDNHLVRTGIAGKRRWTQTEPWRYFQRNPAADETEMD
PEADKTAQINAIKTLVAQTVPALLKQWQAAKTGLEAARSLYHWLTKTGVVDQLNAWREAA
SAAGELARSRAHEQAWTTFTALLDDYVTILGNAKFNREQFHELLAAGFASATYTQIPATL
DAVVISETGLVRLAKAKHVFVIGATSTAMPDVPNDDGVLNSEERQLLAAQLPDDRFLPEQ
GPTTTLGDPFINYLGFMAASETLTLSYPMQNPQENSENQASPYFQQLKRALHLVPETWAP
VTLATTVKSVLGSPRAMLSDFIRAAGDAQQQKRPLSLAWQSVLSALKQTDLANLAQRLAG
SLTYQNDPGRLDPQLAVQLYGRDMNVSVSRLETYYLNHFEYFLKYGLLLQPRPEFELSPA
DTGSLFHAVLDRYLTQLRDQQQNLADVEPAAIMAAVPPMVAEIAKQPGYEILGSTYRMTY
LTKRLSRLLIQVLLNMRQQQQRSGFRPVRTELQFGRIGDTKGLPGLSWPLPHGGRVNVRG
KIDRLDIYREPDARRFIIVDYKSGQRRFDDSDAYYGIALQMLTYIEAMTNVTAEPPFVPA
GALYFHLQDPKLKYTPELEPALERLKAFKYLGFLVAEHGDELAAVDRTISPESGGRSEIA
PLGFKKDGSFNQNLSNVLTPEALRAYLAHNQALIIDAATQILAGDIALEPFQYGQSSTIV
SRSDYQSIMLFDPATGFDHYHHVPKLKRKDVIGRLTADPTQIPHSEKEHPQS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcccggccatcacgcccaaggccgcttacactccgacttctaaccgcgccg
gctcgcgctcacttttctataacgcgctccccggcgcagaagtctgcgtgtaaggacctc
agccgcaatggccaaaaccgggccatcacgtctgaggccgcttacactccgacttctaac
cgcgccggctcgcgctcactttttttaggaggttttcacatggggttgcagtttattctc
ggtgatgcaacgacggatcatacccaaaccatggcggctatgattcatgaaaagcttacc
gctgattcccaaaaccggatttttttactggtaccgaaccatattaaatttgaagcagaa
attgatcttctcaaacgcttgcgtcaattgcaacaggggaactcggagacttacgtgcaa
agtcgcgttcaggtcttatccttttcccggctggcctggttttatttgaagaacacgccg
ctttatcagcaaccgcggctggatcaagctagcaatacgatgttggttgccaagattctt
gcagaacggcaagcggacttaaccatttatgccggagaagctcaacatactggttttgtc
acgcagcttgctgatcaattaagtgaactcatgattggccggattaccgctgaagattta
gccaataccgttgcggctctgacaccaggcgatcggcaccgggctaagttgcgtgattta
ggcattattcttgaccaatatgaagcagaaatcggtccttatgcgacaaccgccagtctg
ctaagtgggctgcagcaagccatgcgtacccatgatctcacccacacgtttatctatctc
aaccattttaacgtattttctgcttcagagtcagcactggtggaaacgatgctggaaact
gctgcagaagtgacaattggcctcgtgttggatcgaccttatccaactgcgccgcctgtg
gctcctaatctctttttaccagctggtcgactttatcatcgtttgtatcaaaaagccaaa
acgatgcgcgctcccattaggatagaccagtttgctcagccgcggcacttaagcttgggc
atgcgacaggtggcgagttggtggcaggctaataccaatattgaaccgcagccggcacca
cccgcaaatgttgccgatcaggtgcatttagccactgcgactgatccgtatcaggaattg
cggcatgtggcccaatctatctatcaagcggttcgcaatggagcacgttatcgggatttt
gtgattcttgcgcggcgattagatccgtatgcaacgatcattccggctatttttgctgaa
tttcagattccccaatttaccgacttgcagcggccgatgaaggatcatcccttggtggtg
ttaatcgaaagtctatttgccatccaggatcatgactatcagtatcaagatatcatgcgc
ttgttgcataccgaacttttgttgccgcaggagatgacggtggcagattatcgcgatgcc
gtcgataccctcgacaatcatttggttcgaacagggattgcaggtaaaagacgctggaca
cagacagaaccatggcggtattttcagcgtaatcccgctgctgatgagacggaaatggat
cctgaagccgataaaaccgctcaaatcaatgccataaaaacgctggtggctcaaactgtg
ccggccttactcaaacaatggcaggcagctaaaaccggacttgaagctgcgcgaagtttg
taccactggttaacgaaaaccggggtagtggaccagttgaacgcgtggcgagaagcagca
agtgcagccggtgagcttgctcgcagccgagcgcacgaacaagcatggaccacatttacc
gctttgctggatgattacgttaccattttgggcaacgctaagtttaatcgcgagcaattt
catgagttgcttgctgccggctttgccagtgcgacttacacacagattcctgccacactt
gacgcggtcgtgatttcagaaaccgggttagtccggttagccaaagcaaaacatgttttt
gtcatcggggccaccagcaccgccatgccggatgttcctaatgatgacggcgttttaaac
agtgaagagcgccaattattagctgcacagttgccggatgaccgctttttacccgagcaa
ggcccgacaacaactttaggtgatccgtttatcaactatttgggcttcatggccgccagc
gagacgttgacgttaagttaccccatgcaaaacccgcaagaaaatagtgaaaatcaggca
tcaccttattttcagcaactgaaacgggcgcttcatctcgtgcccgaaacctgggcgccg
gtaacactcgcaacaacggtcaaatctgtcctcggcagcccgcgggcaatgttaagcgac
ttcattcgggctgccggtgatgcccaacagcaaaaacgacccctgagtctggcttggcaa
agtgtgttaagcgcattaaaacaaaccgacttagccaatctggcccaacgccttgccgga
agtttgacctatcaaaatgatcctggccgccttgatccacagctggcagtgcaactctat
ggacgcgatatgaatgtttccgtgtcgcgattggagacgtactatcttaatcatttcgaa
tattttcttaaatatggtttgctgcttcaaccgcgaccggaatttgagctttcacccgcc
gacaccggtagtctttttcatgccgtgcttgatcggtatttaacccaattgcgtgatcaa
caacaaaacttggccgatgttgaacccgcggcgatcatggctgccgtaccgccaatggtt
gccgagattgccaaacagccggggtatgaaatcctcggcagtacgtatcgcatgacttac
ttgaccaagcgcttaagtcgactgctcattcaggttttgctcaacatgcgccagcaacaa
caacgcagcggcttccgcccggtgcgcaccgagctgcagtttggccggattggcgatacc
aagggactgccaggcttatcatggccgttgccgcatgggggtcgcgtcaatgttcgcggt
aaaatcgatcggcttgatatttatcgcgaacctgatgcacggcgttttattattgtcgat
tataaaagtgggcaacgccgcttcgatgatagtgacgcttattatggcattgccttgcaa
atgctgacttacattgaagcaatgaccaacgtgacggcagagccaccgtttgttccggcg
ggggcgctgtattttcacttgcaggatcctaaactcaaatacacgcctgaattggaaccg
gcacttgagcgactcaaagccttcaagtatctgggtttcttagtcgccgaacacggagat
gagctggcggccgtggatcgtaccatttcaccggaaagtggcggtcgtagtgagattgca
ccgcttggctttaaaaaagatggcagtttcaatcagaatctgtcaaacgtcctgactccc
gaggcgttgcgggcttatttggctcacaatcaggcgctgattatcgatgcagccacgcaa
attctcgcgggggatattgcacttgagcctttccaatatggccagtcttccacgattgtc
agtcgcagcgactatcaaagtattatgctgtttgaccctgcaaccggttttgatcattac
catcacgtccctaagttaaagcgtaaagacgtgattggacgccttaccgctgacccgaca
caaataccgcattctgaaaaggagcatccacagtcatga
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