KEGG   Lacticaseibacillus rhamnosus LOCK900: LOCK900_1553
Entry
LOCK900_1553      CDS       T02730                                 
Name
(GenBank) TRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lro  Lacticaseibacillus rhamnosus LOCK900
Brite
KEGG Orthology (KO) [BR:lro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lro03016]
    LOCK900_1553
Enzymes [BR:lro01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     LOCK900_1553
Transfer RNA biogenesis [BR:lro03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    LOCK900_1553
 Prokaryotic type
    LOCK900_1553
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: AGP71360
LinkDB
Position
complement(1517597..1518502)
AA seq 301 aa
MNGILPLYKPVGMTSADAVYHARKILHIKKIGHSGTLDPSVDGVLPLAIGAATKAVPQLM
ASGKVYTGEITLGFATTTEDLDGDVVTRTPLANPFTQAELDQALRQWTGEITQIPPMFSA
VKVNGKRLYEYARRGETVERPKRQVTVKQFKRTSEPIFDPKQGTQRFKFEAAVSKGTYIR
TLAVDVGRTLGVAAVMSQLTRIKSGGFTLAQAVSLADLEQHAKSGTLAAVIQPIDIAFAA
LPQVDLTSDQYEDVTHGRFLTLKLQASRIRLHYAGVLKAIYRLDHEQYRPDMMFLTNEKN
E
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaacggcattcttccgttatataaaccagtcggcatgaccagcgcggatgctgtctat
catgcacgcaagattctgcatatcaaaaaaatcgggcattccggcacgcttgatccaagt
gttgatggggtgttgccactggcgattggtgcggcaaccaaagcagtcccacaattgatg
gccagtgggaaggtctataccggcgaaatcacactcggctttgcgacaacaaccgaggat
cttgacggcgatgtggtaacgcgcacacctttagctaacccgtttacacaagcagaactt
gatcaggcactgcggcaatggacaggcgaaatcacccagataccgccaatgttttcggca
gtcaaagttaatggcaaacggttgtacgagtatgcccggagaggggaaaccgttgagcgt
ccaaaacgacaagtgacggttaagcaattcaaacgaaccagtgagccaatattcgatcca
aagcagggaacgcagcgatttaaatttgaggctgcggtttcaaaagggacttacattcgc
actttagccgttgatgttggccgcacgctgggagtcgctgccgtgatgagtcagttgacg
cggattaaaagtggcggcttcaccctcgcgcaggcagtgagtcttgcggatctggaacaa
cacgcaaaaagcgggacactggctgccgttattcaaccgattgacatcgcatttgcggcg
ttaccacaagtggatctgacgtcggatcaatatgaagatgtgacgcatggtcgatttttg
acccttaaactgcaagcttcgcggattcggttgcattatgccggggttttaaaggcgatt
tatcgcttggatcacgaacagtatcgacctgatatgatgtttttaacgaatgaaaagaat
gagtga

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