Lacticaseibacillus rhamnosus LOCK900: LOCK900_1654
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Entry
LOCK900_1654 CDS
T02730
Name
(GenBank) Two component transcriptional regulator VraR
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOCK900_1654
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lro02022
]
LOCK900_1654
Two-component system [BR:
lro02022
]
NarL family
LiaS-LiaR (cell wall stress response)
LOCK900_1654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
DUF6115
HTH_40
GH3
HTH_23
HTH_38
DUF742
HTH_24
TadZ_N
SF1-HH
GatB_Yqey
HTH_27
HTH_7
DUF433
DUF2293
Motif
Other DBs
NCBI-ProteinID:
AGP71459
LinkDB
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Position
complement(1617648..1618313)
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AA seq
221 aa
AA seq
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MIKVLIVDDHEMVRLGLSTYIGVQPDLEVVDQAENGQEGVEMALKDRPDIILMDLVMPVK
DGIEATKEILKAWPQARIIILTSFIDDAKVYPAMEAGAASYILKTATAEEIAKAIRQTAS
GERVLEPQVTTKMMNRMNHPQPQYDELTNREREVLQLIAQGKSNQEIATELFITLKTVKT
HVSNILAKLDVEDRTQAAIYALKHGLVKNDQGDDGVATRDH
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagtattgatcgttgatgatcacgaaatggttcgactggggctgtccacctat
attggcgtccaacccgatttagaggtcgttgatcaagccgagaatggtcaagaaggggtc
gaaatggccctgaaagatcgcccggatattattttgatggatttggtgatgccggttaaa
gatggcattgaggcgacaaaagaaattctaaaagcatggccgcaagctcggatcatcatt
ttgacaagttttatcgatgatgccaaagtctatcctgccatggaagccggcgcggccagt
tatattttgaaaaccgcaacggccgaagaaattgccaaggccatccgccagactgccagc
ggggaacgggtacttgagccacaagtcaccacgaagatgatgaatcggatgaatcatccg
cagccgcaatatgacgagctgacgaaccgcgaacgtgaggtattacagcttattgcacaa
ggcaagtcgaatcaggaaattgcgaccgagctctttattacattgaaaaccgttaaaacg
catgtctcaaacatattggccaaattggatgtcgaagatcggacgcaagcagcgatttac
gcgcttaagcatggtctggtaaaaaatgatcaaggagatgatggggttgcaactcgcgat
cactga
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