Lacticaseibacillus rhamnosus LOCK900: LOCK900_1723
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Entry
LOCK900_1723 CDS
T02730
Name
(GenBank) 3'->5' exoribonuclease Bsu YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lro03019
]
LOCK900_1723
Messenger RNA biogenesis [BR:
lro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOCK900_1723
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AGP71528
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All DBs
Position
complement(1685579..1686547)
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AA seq
322 aa
AA seq
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MAKRLFDYHNEEDVRLPVLIKSAEVRVAKNGKKFIAMIFQDNSGHISGKFWDATENDIAQ
FKAGEVVQLSGKRELYQGNPQIKIYSMRLATQEEGNDPRTFVERAPEAPNAMEEELNSFI
FEITNANWNRIVRKLIQDHKKAFFSYPAAKSNHHAFAGGLAFHTLSILRLAKNVVAQYSS
LNKSLLYAGAILHDLGKTIELSGPISTEYTVPGNLIGHIVLIDEQIVLAAHQLKIDINSE
DMLLLRHVVLAHHGLLEYGSPVRPQLLEAQVLHDLDEMDASINMMTTAYQHVDPGTFTER
LFGMDNRRFYRPTNGQTYPDPH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacggctttttgattaccataatgaagaagatgtgcgacttcctgtattaatt
aaatcagcggaagttcgggtagcaaaaaatggcaagaaatttattgccatgatttttcaa
gacaattccggccatatttcgggtaaattctgggatgcaaccgaaaatgatattgcccag
ttcaaagccggtgaagtggtgcagctgtcaggaaagcgggaattgtatcaaggcaacccg
cagatcaagatttactcaatgcgcttggcaactcaagaagaaggaaatgatccgcgtacc
ttcgttgaacgcgcaccagaagcgccaaatgccatggaagaagagctaaacagtttcatt
tttgaaattactaatgccaattggaatcgaatcgtccgaaaactgattcaagatcataaa
aaagcgttcttcagttatccagctgccaagtcgaatcatcatgcctttgccggtgggctt
gcttttcataccctgagtattctgcgcttggctaaaaatgtggttgcccagtattcaagc
ttgaacaagagcttgctttatgcgggtgcgattttacatgacttgggcaagacgattgaa
ttaagtggtccgatttcaactgaatacacagtacccgggaatctgattgggcatattgtt
ctgatcgatgaacaaattgtgttggcagcccatcaactaaagatcgatattaatagtgag
gatatgctattgctgcggcatgttgtattagcgcaccatggtttattggaatatggctcg
ccggtgcggccgcaactacttgaagcccaggtgttgcacgatttggacgaaatggatgcc
tcaatcaacatgatgacgactgcctaccaacatgtcgatccaggcacctttactgaacga
ctctttggcatggacaatcggcgcttctaccggccgacaaatggtcaaacatatccggat
ccgcattaa
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