Lacticaseibacillus rhamnosus LOCK900: LOCK900_2444
Help
Entry
LOCK900_2444 CDS
T02730
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LOCK900_2444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lro03021
]
LOCK900_2444
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_2444
Enzymes [BR:
lro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LOCK900_2444
Transcription machinery [BR:
lro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LOCK900_2444
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LOCK900_2444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AGP72235
LinkDB
All DBs
Position
complement(2426753..2427691)
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITKVDESTNYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVSSIQIDGVL
HEFSTIDGVLEDVTQIILNIKKLALKMNTDEDKNIEIDVNGPAKVTAADIVADPDVEVLN
PEQYICTVADGGHFHVRMTVKKGRGYVAADQNKSDDMPIGVLPIDSIFTPISRVNYQVES
TRVGRRNDFDKLTLDVWTNGSISPREAISLAAKILTEHLDIFVNLTDEAKNAEIMVEKEE
THKEKMLEMTIEELDLSVRSYNCLKRAGINTVQELTNKTEADMMKVRNLGRKSLEEVKNK
LADLGLGLRKED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattcgaaaagccgaacattaccaaagttgacgaaagcaccaactatggcaag
tttgtggttgaaccgttggaacgcggctacggtactacgttaggtaactcgttgcggcgg
atccttctttcttcattaccgggcgcagctgtcagcagcattcaaattgatggggtactt
catgagttctccacaattgatggtgtattggaagatgtgactcagatcattttgaatatc
aagaaattggcactcaagatgaacactgatgaagataagaacatcgaaattgatgtcaac
ggtccggctaaggtaactgctgctgatatcgtcgctgatcctgatgttgaggtcttaaat
cctgaacagtatatctgtactgttgcagacggcgggcacttccatgtacgtatgaccgtt
aaaaagggtcgcgggtatgtggcagctgaccagaataagtctgatgacatgccaatcggt
gttttgccgatcgactcgattttcaccccgatcagccgggttaactatcaagttgaaagc
acccgtgttggccgtcggaatgatttcgacaagttaacgctggatgtttggacgaatggc
tcaatctcgccacgtgaggccatcagcttagcagcgaagatcctgactgaacacctggat
attttcgtcaatttgacggatgaagctaagaacgctgaaattatggttgaaaaagaagaa
acgcacaaggaaaaaatgcttgagatgaccatcgaagagcttgacttgtcggttcgttcc
tacaactgcttgaagcgtgccgggattaatacggtccaggagttaaccaacaaaacagaa
gccgatatgatgaaagttcgtaacttaggccgcaagtcacttgaagaagttaaaaacaag
ttggcagatcttggcttaggattgcgtaaagaagactaa
DBGET
integrated database retrieval system
