Lacticaseibacillus rhamnosus LOCK900: LOCK900_2548
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Entry
LOCK900_2548 CDS
T02730
Name
(GenBank) DNA-directed RNA polymerase delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lro
Lacticaseibacillus rhamnosus LOCK900
Pathway
lro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LOCK900_2548
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lro03021
]
LOCK900_2548
03400 DNA repair and recombination proteins [BR:
lro03400
]
LOCK900_2548
Transcription machinery [BR:
lro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LOCK900_2548
DNA repair and recombination proteins [BR:
lro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LOCK900_2548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AGP72326
LinkDB
All DBs
Position
complement(2523287..2523967)
Genome browser
AA seq
226 aa
AA seq
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MYRLKLKAFANADKSELSMIEVAHEILEEKGDTMAFVDLANEIQNYLGKSDEEIRERLPQ
FYTDLNVDGSFISLGDNVWGLRAWYPYDSVDEEVNHPEDEEEVPRRKKRKKVNAFLADVA
DDDDVIDYNDDDPEDEDLDADSDDDDFDDDDSTGFHDKIGKAGDSDDDSDDDPDDGLPDG
IEGQLAEFGDNDSDEDDDTDDITADFSGDDDDDSDDADDEDDNDKH
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgtatcggttgaaactcaaagcatttgccaatgccgataaatcagaattatcaatgatc
gaagtagcccatgagatcctcgaagaaaaaggggataccatggcgttcgttgatctggcc
aatgagatccagaattatctcggtaagagtgacgaagagattcgtgaacgtttgccgcaa
ttctatacggatctcaatgtggatggcagcttcatttctttaggcgataacgtttggggc
ctgcgcgcttggtatccatacgattccgttgatgaagaagttaaccatccggaagacgaa
gaagaagtgccacgtcgcaagaaacgtaagaaagttaatgctttcttggcggatgttgcc
gatgacgatgacgtgatcgattacaacgacgatgatcctgaagatgaagatctcgacgct
gatagcgatgacgatgatttcgatgatgatgacagcactggctttcatgacaagatcggc
aaggccggcgatagtgacgatgacagcgatgatgatcctgatgatggacttcccgatggc
attgaaggtcagctagctgaatttggagacaatgacagcgacgaagatgacgacaccgat
gacatcacagctgacttctccggcgatgacgatgatgacagcgatgatgctgacgatgaa
gacgacaacgataaacattaa
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