Labeo rohita (rohu): 127151826 Help Entry 127151826         CDS       T09007                                  Symbol afdna Name (RefSeq) LOW QUALITY PROTEIN: afadin   KO K05702   afadin Organism lroh  Labeo rohita (rohu) Pathway lroh04517   IgSF CAM signaling lroh04520   Adherens junction lroh04530   Tight junction Brite KEGG Orthology (KO) [BR:lroh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     127151826 (afdna)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     127151826 (afdna)    04530 Tight junction     127151826 (afdna) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RA DIL PDZ FHA RA_2 PDZ_6 PDZ_2 RA_3 RASSF8-10_RA Yop-YscD_cpl Motif Other DBs NCBI-GeneID:  127151826 NCBI-ProteinID:  XP_050948128 LinkDB All DBs Position 20:27397847..27532734 Genome browser AA seq 1853 aa AA seqDB search MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD DREGRFVLKNENDIIPKRTLINGPEKEKEGVIQNFKRTLSKKEKKKEKKREKEAFSRIPD GDDHALNREDGENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSGDG RPDSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVAEALEKYGLEKENPRDYCIAQVIH VNDKPVKETILDDTDCPLQILRDWTSDKEALVFQLKKRPPDCAPGKVRKPDGRIWPHGSI PPEKLPYLVELSPGRGSHYAYYYRHQDGSDSRDKPKLYRLQHSVTEVGSDRSEDGNIQLF GPGILPHHCDLMHEDGLVTVTPVSLDAETFVDGQRISDTTILRSGVTVQFGATHVFKFVD PSYDHSMSKRDPGPMMKARHKSGSVPETTFDLHGDVHSGSALPTSKSSGKLEMERSGNSE RGLVKPMIRGEQQDFNKHDGRSQDGPELTLPASIEFRENSEDAFLSAIINYTNSSTVHFK LSPTYVLYMTCRYVMSSQYRPDISPSERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFW MANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVHCLQSDLNNYMPAFLEDPDE QNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTEADSGLC SHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNINNTCF KLNSLQLNALLSNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGREVQLEEDPDLQL PFLLPEDGYSCDVVRNIPNGFQEFLEPLCQRGFCRLTPHPRSPGTWTIYFEGADCDSHFS ADTSELPMRKEPEIVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVKGGAADMDGRLA AGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMPRA SDRGRGDKGKMRPKSEGFELYNNSVQNGSPESPQGTWDTYPEPKKEDRLLKNRADHRSSP NVANQAQSPGGKPVYPGAPGKITSVSTGNLCPDEEPSPPRPEAYPIPTQTYPREYFTFPA SKSQDRMGPGQPWQNNEPEPLPPMDNHSNNSMAMQRIARSQEELSEMPGGYPGERLRQED LMHLQQQQREAEYPRGGGDHWNHQMSSSVESSTSSQEHLNFSSSSGSRMQGNHKSGPGRW KTPIAPHSGPVGVSQPSRSDLPPPPPPPPAHYDYEPQPDLPLPPPPSTTQQQAAAAAATA DRKKREEQQRWYEKEKARLEEERDRKRRDQERKLVQIRNPPGPVMHNNQHGPLPPAPQHQ QMPHQQPPMQVPQPYLPPVQPAQPPPPQPARPDKLSSLPRQPPQDTVIRDLLPQQQPRTI ERRDLQYITISKEELSASDSLSPDPWKRDAREKLEKQQQLHIVDLLDKEIQDLQAKPERT AEENDRLRKLMLEWQFQKRLQESKQNEEDEEEEDDEDVDTTLIMQRLEAEKRARQTAVPA ISVLDLLQDEERRRKQQLEEIRKREAEERAKQEEERRWREEERARRETDEKRRQEEEYYT RLEAERRRQHEEAERKLLTPDEPGLYRPPLPRDYQPPSPASTPATNNNSAPPPPPQRNTS YLKTQVASPDTIYTAKFVSYNDEEEEEDEEDAGLTGFNSYTGDTTGLGSGEIYKDPREKW TKGPDQENTIGGAPENLTFRERQRLFSQGKEVSNKVKASRKLMELENELNIKQ NT seq 5562 nt NT seq  +upstreamnt  +downstreamnt atgtcggggagccgagaggaggagcggcggaaactcgccgacatcatcaaccactggaac gccaaccggctcgacctgttcgagatcagccaaccgactgaggacttggagttccatggc gtgatgcgcttttacttccaggaccgggtggcggggaactttgccacaaagtgtatccga gtgtccagtacggcgaccacgcaggatgtgatcgagacgctggcggaaaagttcagaccg gatatgaggatgctgtcttctcccaaatactccctctatgaggtccacgtcagtggcgaa gagaggaaactggacttggatgagaaaccactggttgtacaattgaactggaacaaagac gacagagagggccgcttcgttctcaagaacgagaatgacatcattcccaagagaacactg ataaatggccctgagaaagagaaggagggggtgattcaaaacttcaaaagaacgctgtcc aagaaggagaagaagaaagagaagaagagggagaaggaggccttttccagaattccagat ggagatgatcacgcgctgaaccgcgaggatggagagaactctagattggctgcagaggtg tataaagacatgccagagaccagtttcacacggaccatttctaacccagaggtggtgatg aagaggagacgacagcagaagctggaaaagaggatgcaagaattccgcagcggagacggt cgaccggattcaggagggactctgaggatctatgctgatagtctgaagcctaacattccc tacaagaccatcctgctctcaactactgatatggctgactttgctgtggccgaggctctg gagaaatatgggctggagaaagaaaatcccagagattactgcatcgcccaggtgattcat gtaaatgataaaccagtgaaggagaccatacttgatgacacagattgccccctgcagatc ctcagagactggacaagcgataaagaggccttagtattccagctgaagaagcgtcctcca gactgtgcaccagggaaagtacgtaagccagacggcaggatttggcctcacggatccatt cctcccgagaaactgccctacctggttgaactgagcccagggcgagggagtcactatgcc tactactaccgccatcaagatgggtcggactccagggataaacccaaactttacagacta cagcacagcgtcacagaggtcggatctgaccggagtgaagacggaaacatccagctgttc gggcctgggattctccctcaccactgtgacctgatgcatgaggatggactagtgactgta acccctgtcagtttggatgctgagacgttcgtggatggacagcggatctcagacactacg attctgcgcagcggcgtaactgtccagttcggagccactcacgtcttcaaatttgtagac cccagctatgaccacagcatgtccaagagagacccagggcccatgatgaaggcccgacac aaatcaggaagtgtcccagagacgacctttgaccttcacggggacgttcatagtggctcc gctctccctacaagcaagagctcagggaagctggagatggagcgttcaggaaacagtgaa agaggcctggtcaaacccatgattagaggagaacagcaggactttaataaacatgatgga aggtcccaggacggcccagaactcactctgccagccagcattgagttcagggaaaactcc gaggatgccttcctgtctgccatcattaactacaccaatagctcaacggtgcacttcaag ctgtctcccacttatgtgctgtacatgacctgccgttacgtcatgtccagccaataccgg cccgacatcagtccctctgaacgcacgcacaaagttattgccattgtcaacaagatggtg agcatgatggaaggagttatccagaaacagaagaacatcgccggggctctggccttttgg atggctaatgcctcagagctgttgaacttcatcaaacaggacaaggatctgagtcgcatc acgctagatgcacaggatgtcctcgctcacctggttcagatggcttttaagtacctggtg cactgcctgcagtcggatctgaataactacatgccagcttttctggaagatcccgatgaa cagaacccacagaggcccaagatagaggatgttctgcacacgttaacgggcgccatgtct cttctgcggcgatgcagagtaaacgcggctctcaccattcagctgttctcacagctcttc cactttatcaacatgtggctctttaacaagctggtgacggaggccgattcgggcctgtgc tcgcactactggggcgccatcctgcgacagcagctcagccatatcgaagcatgggctgag aaacagggtttggagctggccgcagactgccacctcagccgcatagtccaggcaaccact ctcctcaccatggacaaatactccatgcaagatgtgcagaacatcaacaacacctgcttc aagctcaactctctgcagctcaacgctctgctgagcaactaccactgcgctcctgatgag ccttacattcctcctgagctgattgatcacgttgtggctgtggccgagaacacagcagat gaactggccagaagcgatgggcgggaagtacagctggaggaggaccctgacctgcagctg cctttcctactgcccgaggacggctactcgtgcgatgtggtgcggaacattcccaacgga ttccaggagttcctagagccactttgccagagaggtttctgtcgattgacacctcatcca cgctctccgggaacttggaccatctattttgaaggagccgattgcgacagtcacttctca gctgacacgtcagaactgccaatgcggaaggaaccggaaattgtgacagtgactttgaag aaacacaatgggatgggcctcagtattgtggcggccaagggtgccggacaggacaaactt ggtatttacatcaagtctgttgtcaaaggaggtgcggcagacatggatggccgtctggct gccggagaccagttgctcagcgtggatggacgaagtctggtcggcctctcgcaggagagg gcggcggaattgatgacaagaaccggttcggtcgtaacgctcgaggtggccaaacaggga gctatttaccatggtctggccacgctcctcaaccagccgtcccccatgatgccccgtgca tcagaccgtggacgtggagacaagggaaagatgagaccaaagagcgagggctttgagctc tataataattctgtgcagaacggctcgcctgagagcccccagggcacgtgggacacctat cctgaaccaaagaaggaggacaggttgttgaagaaccgtgcagatcaccgctccagccca aatgtggctaaccaggctcagagtccaggcgggaagcctgtttacccaggagctccagga aagatcacttcggtctcgacgggtaacctctgtcctgatgaggagccctctccaccccgt ccagaggcgtatccgatccccactcagacttacccaagggaatacttcaccttcccagcc tccaaatctcaggataggatgggccccggccagccctggcaaaacaacgaaccagagcct ctcccgcctatggataaccactctaacaacagcatggctatgcagcggattgcacgctct caggaggagctgagcgagatgccaggtgggtacccaggtgaacgcctgcgccaggaagac ctgatgcacctgcagcagcaacagcgtgaggccgagtacccacgaggtggtggtgatcac tggaaccaccagatgtcctcctcggtggagtccagcacctccagccaagagcacctcaac ttctcatcgtcttctggctccaggatgcaaggcaatcacaagagcggccctggccgctgg aagaccccgatagcaccccattctggccctgtgggcgtctcgcaaccctcccgttcagat cttccacctcctcctcctccaccacctgcacactacgactatgagccgcaacccgactta ccacttcctccaccgccctctactacacagcaacaggcagcggctgctgcggccacagcc gaccgcaagaaacgtgaggagcagcagcgctggtatgaaaaggaaaaggccaggcttgaa gaggagcgagacaggaagagaagagaccaggagaggaagctggtgcagattcgcaaccct ccaggaccagtcatgcacaacaaccagcacggcccgctgccgcccgcccctcagcaccaa cagatgccccatcaacagccccccatgcaggttccccaaccataccttcctccagtccag ccagcccaaccgccaccaccacaacctgctcgacccgacaagctatccagccttccccgc cagccaccacaggacacggtaatccgtgacctcttgccccagcagcagccacgcaccatt gaaagacgtgacctgcaatacatcaccatcagcaaggaggagctgtccgccagcgacagc ctatcgcccgacccctggaagagggacgcccgcgagaaactggagaagcagcagcagctt cacatcgtggacctcttggataaggagatccaggatcttcaggccaaacccgaacgcacg gccgaggagaacgaccgtctgcgcaaactcatgctggagtggcagttccagaagagactg caggagtccaagcagaacgaggaggatgaggaagaggaggatgatgaagatgtagacacc acactaattatgcagagactggaggctgagaagagagcacggcagactgctgttccagca atctctgtactagacttgctacaggacgaggagcgacgacggaagcagcagttggaggaa atccgtaagcgtgaagcagaagagcgagccaaacaggaggaggagagacgctggagagaa gaggagagagccagacgagagaccgatgagaagaggagacaggaggaagagtactacacc cgcctggaggcagagcggcgccggcagcacgaggaagccgagcgcaagctgctgacgcca gacgagcctggtctgtacagaccccccctaccccgggactaccagcccccttctcccgca agcacccccgccactaacaacaacagcgcccctccgcccccgcctcagagaaacacctcc tacctcaaaacccaggtcgcctcccccgacaccatatacactgccaagtttgtctcatac aatgacgaggaggaggaggaggatgaggaggatgcgggcctaacaggatttaattcatac actggagacacaacaggactaggatcaggagagatttacaaggacccgcgagagaagtgg acgaaaggccccgaccaggaaaacacaataggtggagctccagaaaacctgacatttagg gagcgccagagactcttctcacagggaaaggaagtgtcgaataaagtgaaagcatcccgg aagctcatggaactggagaacgaactgaacataaagcagtag

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