Labeo rohita (rohu): 127151908
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Entry
127151908 CDS
T09007
Symbol
trpc2b
Name
(RefSeq) transient receptor potential cation channel subfamily C member 2b
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127151908 (trpc2b)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127151908 (trpc2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
127151908
NCBI-ProteinID:
XP_050948178
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All DBs
Position
21:complement(10963909..10978977)
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AA seq
1047 aa
AA seq
DB search
MMENLTPEQWREIVNKKFRFPPELLGAIREGNVNMVSSLLKTGDGIIRQLDDSEDRLWRE
ALNLSIRLGNEDTMDNLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDLEKGNKMD
VRSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYDIVTMLNQKGHEIPWPHKISCVCLEC
RNGRQYDLLKFSLSRINTYRGIASRAYLSITAEDAMLSAFRLSRDLRKLSKKEPEFKPQY
LALEQLCQEFAVELLGMCRNQSEVTTILNSLGDKDEDSEDELDQQAFEEGIPNLARLRLA
VNYNQKQFVAHPICQQVLSSIWCGNLSGWRGSRTAWKLLVSFGIFLTMPILSLIYWIAPK
SKLGKTLRIPVIKFLLHSASYMWFLITLLGESIAMEVYRDSFASREQTILHNSFHMVWVV
GFFWFECKEIWIEGLKSYFLDWWNCLDVMVLSMYLASFALRVVIMLKVHFLCQLPDKEEE
CVYFTETMRNEWHQEDPQFIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDM
MRFMFILVIIGTAFLCGVNNIYVPYMISPNLGRLNETFSFLFWTMFGMADQTYVDMPEFV
LAEFVGRILYGIYTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGL
TMPVPFNIIPSPKAVFYLLRGIVRRICCCCFNCNSAPDYPPLASMKDDMGAGENRIPYRQ
QVIRALVQRYIESARREFEETKRKDVGNRITELSKVIGQLHTEMKHIQMNLFDHSDNPKG
NPSGGSSFLGKYILGAKNNFRGFNSNERSTVPLHEPILHEEPAEKTVEENDEETADVQES
PPADTEPDRKSNEEQSSEGEIDNAVEDMNETEGGEEEGDVETGNDDVTEISMDEEKEEEA
EKNTDAENTSETVIDIESNTDAESEASGNREDEMIAEEVNDNTDEATGETDQNEAETEEN
GEVEESSGTTEDINEDIVDVISENTGEGIKIDLNKANLVSFLAKRIEEKLERNFSFIANQ
ASSPTGSDDSQDTGFGSQEFDLSTSGP
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaacctaacgccagaacaatggcgcgagattgtgaacaagaagtttcgcttc
cctccggagctcctcggggccatccgagagggcaacgtgaacatggtctcttcgctgctg
aagacaggtgacggcatcatccgccagctggacgactccgaggacaggctatggcgagaa
gcgctgaacttgtccatccgactgggcaacgaggacaccatggacaaccttctccaagga
gtcaagtttgatttccggcagattcacgaagctcttctggtggccgtggacaccaaccag
cctcgtgtggtcaaacgcctcctggatcggcttgatctagagaaaggaaacaagatggat
gtgcgctctttctcaatggccatttttgaccactccattgatgattcccaatttgctcct
ggagtgacaccattgacactggcctgtcagaaggatttatatgacattgtgacaatgctc
aatcagaaaggtcatgaaattccttggccgcataaaatctcatgcgtgtgtctggagtgc
agaaacggtcgtcagtacgatttgctcaagttctctttgtctcgtatcaatacctaccga
ggaattgccagccgtgcttacctatccatcaccgcagaagatgccatgctcagtgccttt
cgactcagccgggatctccgcaagctgtctaaaaaggaacctgaatttaagcctcagtat
cttgccctggagcagttgtgccaggagtttgccgtggagctgcttggaatgtgccggaac
caaagtgaggtcaccaccatcctgaacagccttggggataaggatgaggacagcgaggac
gaactggaccagcaggcatttgaggagggcatcccaaacctggctcgcttaaggcttgcc
gtcaactataatcaaaaacaatttgtagcccacccgatctgccagcaggtgctctcttct
atctggtgtgggaacctttcaggctggaggggcagcagaacggcctggaagctcctggtg
tcttttgggatcttcctgaccatgcctatcctttccctcatctactggattgcaccgaag
tcaaagttgggaaagaccctaaggatcccagttatcaaattccttctccattcagcttca
tatatgtggttcctgatcacgcttctgggagaatccattgccatggaggtgtatcgagac
agctttgcctctcgtgagcagaccatcctgcacaactccttccacatggtctgggtagtt
gggtttttctggtttgagtgtaaggaaatttggatcgagggcttgaagagctattttcta
gactggtggaactgtctggatgtgatggttcttagcatgtatctggcttcattcgccctg
agagtggtcatcatgctcaaggtccacttcctctgccagttgcctgacaaagaggaggag
tgtgtctacttcaccgagaccatgcgtaatgagtggcatcaggaggatccccagttcatc
gccgaggtgctgtttgcggtgaccagcatgctgagtttcactcgcctggcctacatccta
ccagcacacgagtctcttggtaccctgcagatctccattggaaagatgattgacgacatg
atgagattcatgttcattttggtgatcattggaactgccttcctgtgtggcgtcaacaat
atctatgtcccatatatgatttcccctaatcttggaaggttaaatgaaacattcagcttc
ctcttctggactatgtttggtatggctgaccaaacgtatgtggacatgcctgagtttgtt
ttggctgagtttgttggcagaatcctttacggtatctacaccctggtcattgtcattgta
ctcctaaacatgctcattgctatgatcaccaactcttttcagaagattgaggatgatgct
gatgtagagtggaaatttgcccgttcaaagctctacctgagttacttcagagaaggactg
actatgcctgtccccttcaacatcatcccctctccaaaggccgttttctatcttttgaga
ggaattgtcagacgaatctgctgctgctgcttcaactgtaactctgctccagactaccct
ccgcttgcatctatgaaggatgacatgggtgcaggggagaaccgcattccctacagacag
caggtcatccgcgctctggttcagcgctacattgagtctgccaggagagagtttgaagag
acaaaacgcaaagacgttgggaacaggattacagagctgagcaaagtgatcggccagcta
cacactgaaatgaaacacattcaaatgaacctgtttgaccactcagacaaccccaaagga
aacccgtcaggaggatcttctttcctgggaaagtacatccttggagccaaaaacaacttt
aggggcttcaacagcaatgagagaagcactgttccattacatgagcctatactccatgaa
gaaccagcggagaagactgtggaagagaatgatgaagagactgcagacgtgcaggagtca
ccgcccgctgatacagagccagacaggaagtcaaatgaagagcaaagtagtgagggagaa
atagataatgctgtggaagacatgaatgagactgaggggggagaagaagagggggacgtg
gagacaggaaatgatgatgtcactgagattagcatggatgaagagaaggaggaggaggct
gaaaagaatacagatgcagagaatacaagcgagacagttatagatatagagtccaacaca
gatgctgaaagtgaagctagtgggaacagagaagatgagatgatagcggaggaagtgaat
gataatacagatgaggcgacaggagaaacagatcaaaatgaagcagaaactgaggaaaat
ggagaggttgaggaaagtagtggaacgacagaagatataaatgaggacatagttgacgtc
atcagtgagaatacaggtgagggcatcaagattgacctgaataaagcaaacctagtgagt
ttcttagcaaagaggatagaggaaaagctagaaaggaatttcagtttcattgcaaaccaa
gcatcatctccaactggcagcgatgactcccaagacaccggtttcggttctcaagaattt
gacctctcaactagcggtccttaa
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