Labeo rohita (rohu): 127152009
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Entry
127152009 CDS
T09007
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127152009 (pus1)
Enzymes [BR:
lroh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
127152009 (pus1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127152009 (pus1)
Prokaryotic type
127152009 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
127152009
NCBI-ProteinID:
XP_050948350
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All DBs
Position
21:21756282..21760440
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AA seq
419 aa
AA seq
DB search
MLRSSRIIHILSRLTFIPTLKNKGWPDSVLKSRGFCMSCKMTEDSSDAQIKALKRAADDT
PVEAEHEGKKLKTEQDERKYPKKKVALLMAYSGKGYYGMQRNAKNSQFRTIEDELVTALV
KAECIPEGHGDDMKKMSFQRCARTDKGVSAAGQVVSLKVWMIDNILDKINAHLPPHIRIL
GYKRVTGGFNSKNNCDARTYSYMLPTVSFSPKDYNQEDTSFRLNSETLQKVNRLFSLYKG
THNFHNFTSQKGPRDPSAKRYITHMSCGEPFVRQEAEFAVITVRGQSFMMHQIRKMIGLV
IAVVKGYVDEAVIERSWGEDKVDVPKAPGLGLVLERVHFDRYNKRFGGDGIHETLDWTEE
EEAIAAFKDKHIYPSIVETELNEKSMVNWMATLYIHDFEATSTGNQERKDDDEDGNVSD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtcctctcggatcattcatattttatcacgtctcacatttattccaactctc
aagaacaaagggtggccagattctgtgttaaaatcccgtggattttgcatgtcctgcaag
atgactgaggattcatcagacgcccaaatcaaagccttgaaaagagcagcagatgacacg
cccgttgaggctgagcatgaagggaagaagcttaaaacagagcaggatgagaggaaatat
cctaagaaaaaggtggccctgctgatggcatactcagggaaagggtattatgggatgcag
agaaatgcaaagaactctcagtttagaaccattgaggatgaactggtcactgctcttgtc
aaagcagaatgtattccagagggccatggagatgacatgaagaaaatgtctttccagcgg
tgtgcacgaacggataagggagtttctgctgcgggtcaagttgtctctctgaaggtgtgg
atgattgacaacatcctggacaaaattaatgcacatctgccgcctcacataagaatttta
ggttacaagcgagtcacgggtggcttcaattccaaaaacaactgcgatgccagaacatat
tcctacatgcttcccactgtgtctttctccccaaaggactataaccaggaggacacgtca
ttccgtctgaattcagagacccttcagaaggtcaaccggttatttagcctatacaaaggc
acccacaacttccacaacttcacttcgcaaaaaggtccacgggaccctagcgccaagcgc
tacatcacccacatgtcctgcggagagccgtttgtaagacaggaagctgagtttgccgtc
atcacggtacgaggccaaagcttcatgatgcaccagatccggaagatgatcggtcttgtg
atcgctgtagttaaaggatatgtggatgaagcagtgatcgagaggagctggggagaagac
aaagttgacgttcccaaggctcccgggctcggattagtgctggagagggtgcactttgac
cgatacaacaaacgcttcggaggagacggcattcatgagactctggactggactgaggaa
gaagaagccatcgctgcttttaaggacaagcatatttatcccagcatcgtagagactgag
ctcaatgagaagtccatggtgaactggatggctactctatatatccatgattttgaagcc
acgtccacgggaaaccaagagcgcaaagatgatgatgaagatggaaacgtgtcagattga
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